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  5. Dde_g13213

Dde_g13213 (EMB1135)


Aliases : EMB1135

Description : not classified & original description: none


Gene families : OG0002623 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002623_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Dde_g13213

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00037p00121600 EMB1135,... Protein FORGETTER 1 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
Adi_g021474 EMB1135 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g16049 EMB1135 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g59829 EMB1135 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Cba_g04085 EMB1135 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cre01.g053250 EMB1135 Protein FORGETTER 1 OS=Arabidopsis thaliana 0.01 OrthoFinder output from all 47 species
Cre02.g095045 EMB1135 Protein FORGETTER 1 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
Cre13.g578501 EMB1135 Protein FORGETTER 1 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
Dcu_g13353 EMB1135 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g06216 EMB1135 not classified & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01036703001 EMB1135 Protein FORGETTER 1 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
Gb_10957 EMB1135 Protein FORGETTER 1 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
LOC_Os04g52030.1 EMB1135, LOC_Os04g52030 Protein FORGETTER 1 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Mp1g14790.1 EMB1135 Protein FORGETTER 1 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Msp_g05644 EMB1135 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pnu_g09907 EMB1135 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g02413 EMB1135 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g37175 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e040038_P001 EMB1135, Zm00001e040038 Protein FORGETTER 1 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Zm00001e041616_P001 EMB1135, Zm00001e041616 Protein FORGETTER 1 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003723 RNA binding IEP HCCA
MF GO:0004175 endopeptidase activity IEP HCCA
MF GO:0004222 metalloendopeptidase activity IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005515 protein binding IEP HCCA
BP GO:0006508 proteolysis IEP HCCA
MF GO:0008233 peptidase activity IEP HCCA
MF GO:0008234 cysteine-type peptidase activity IEP HCCA
MF GO:0008237 metallopeptidase activity IEP HCCA
MF GO:0016409 palmitoyltransferase activity IEP HCCA
MF GO:0016747 acyltransferase activity, transferring groups other than amino-acyl groups IEP HCCA
InterPro domains Description Start Stop
IPR026937 SBNO_Helicase_C_dom 722 1013
IPR019787 Znf_PHD-finger 641 687
IPR039187 SNO_AAA 164 464
No external refs found!