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  5. Dde_g10623

Dde_g10623


Description : component *(uL22) of large ribosomal-subunit (LSU) proteome & original description: none


Gene families : OG0001495 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001495_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Dde_g10623

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00013p00211990 evm_27.TU.AmTr_v1... Protein biosynthesis.cytosolic ribosome.large subunit... 0.03 OrthoFinder output from all 47 species
AMTR_s00013p00223470 evm_27.TU.AmTr_v1... Protein biosynthesis.cytosolic ribosome.large subunit... 0.03 OrthoFinder output from all 47 species
AMTR_s00013p00224030 evm_27.TU.AmTr_v1... Protein biosynthesis.cytosolic ribosome.large subunit... 0.04 OrthoFinder output from all 47 species
AT1G27400 No alias Ribosomal protein L22p/L17e family protein 0.03 OrthoFinder output from all 47 species
Als_g41139 No alias component *(uL22) of large ribosomal-subunit (LSU)... 0.03 OrthoFinder output from all 47 species
Cpa|evm.model.tig00001215.8 No alias Protein biosynthesis.cytosolic ribosome.large subunit... 0.01 OrthoFinder output from all 47 species
Cre13.g568900 No alias Protein biosynthesis.cytosolic ribosome.large subunit... 0.01 OrthoFinder output from all 47 species
GSVIVT01008528001 No alias Protein biosynthesis.cytosolic ribosome.large subunit... 0.03 OrthoFinder output from all 47 species
LOC_Os08g41810.1 LOC_Os08g41810 component RPL17 of LSU proteome component 0.04 OrthoFinder output from all 47 species
Lfl_g31086 No alias component *(uL22) of large ribosomal-subunit (LSU)... 0.03 OrthoFinder output from all 47 species
MA_10430182g0010 No alias component RPL17 of LSU proteome component 0.03 OrthoFinder output from all 47 species
MA_64923g0010 No alias component RPL17 of LSU proteome component 0.02 OrthoFinder output from all 47 species
Mp1g10230.1 No alias component RPL17 of LSU proteome component 0.03 OrthoFinder output from all 47 species
Ppi_g26817 No alias component *(uL22) of large ribosomal-subunit (LSU)... 0.03 OrthoFinder output from all 47 species
Sam_g15137 No alias component *(uL22) of large ribosomal-subunit (LSU)... 0.03 OrthoFinder output from all 47 species
Smo96251 No alias Protein biosynthesis.cytosolic ribosome.large subunit... 0.02 OrthoFinder output from all 47 species
Solyc06g071870.3.1 Solyc06g071870 component RPL17 of LSU proteome component 0.02 OrthoFinder output from all 47 species
Solyc06g071880.4.1 Solyc06g071880 component RPL17 of LSU proteome component 0.03 OrthoFinder output from all 47 species
Tin_g05352 No alias component *(uL22) of large ribosomal-subunit (LSU)... 0.03 OrthoFinder output from all 47 species
Zm00001e003661_P001 Zm00001e003661 component RPL17 of LSU proteome component 0.04 OrthoFinder output from all 47 species
Zm00001e005470_P001 Zm00001e005470 component RPL17 of LSU proteome component 0.03 OrthoFinder output from all 47 species
Zm00001e021953_P003 Zm00001e021953 component RPL17 of LSU proteome component 0.03 OrthoFinder output from all 47 species
Zm00001e026882_P002 Zm00001e026882 component RPL17 of LSU proteome component 0.03 OrthoFinder output from all 47 species
Zm00001e031261_P001 Zm00001e031261 component RPL17 of LSU proteome component 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEA Interproscan
CC GO:0005840 ribosome IEA Interproscan
BP GO:0006412 translation IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003723 RNA binding IEP HCCA
MF GO:0004175 endopeptidase activity IEP HCCA
MF GO:0004222 metalloendopeptidase activity IEP HCCA
MF GO:0004518 nuclease activity IEP HCCA
MF GO:0004519 endonuclease activity IEP HCCA
MF GO:0004521 endoribonuclease activity IEP HCCA
MF GO:0004523 RNA-DNA hybrid ribonuclease activity IEP HCCA
MF GO:0004540 ribonuclease activity IEP HCCA
MF GO:0005337 nucleoside transmembrane transporter activity IEP HCCA
MF GO:0008194 UDP-glycosyltransferase activity IEP HCCA
MF GO:0008237 metallopeptidase activity IEP HCCA
BP GO:0015858 nucleoside transport IEP HCCA
BP GO:0015931 nucleobase-containing compound transport IEP HCCA
MF GO:0015932 nucleobase-containing compound transmembrane transporter activity IEP HCCA
MF GO:0016787 hydrolase activity IEP HCCA
MF GO:0016891 endoribonuclease activity, producing 5'-phosphomonoesters IEP HCCA
MF GO:0016893 endonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 5'-phosphomonoesters IEP HCCA
BP GO:0071702 organic substance transport IEP HCCA
BP GO:0071705 nitrogen compound transport IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:0140098 catalytic activity, acting on RNA IEP HCCA
MF GO:0140640 catalytic activity, acting on a nucleic acid IEP HCCA
BP GO:1901264 carbohydrate derivative transport IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
MF GO:1901505 carbohydrate derivative transmembrane transporter activity IEP HCCA
BP GO:1901642 nucleoside transmembrane transport IEP HCCA
InterPro domains Description Start Stop
IPR001063 Ribosomal_L22 17 152
No external refs found!