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  5. Dde_g10540

Dde_g10540


Description : transcription factor *(NIN) & original description: none


Gene families : OG0000692 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000692_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


h id="path4152" d="m322.26 528.99c-0.82456-3.2982-42.199-23.901-63.207-15.562-23.501 9.328-31.924 40.351-30.167 39.983-1.6704 2.0879 29.042 12.067 42.617 7.422 13.574-4.6447 26.092-23.153 50.757-31.843z" stroke="#114b00" stroke-width="1px" fill="url(#linearGradient4305)"/>
Type Description Actions
Neighborhood HRR: Dde_g10540

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00044p00173720 evm_27.TU.AmTr_v1... External stimuli response.biotic... 0.06 OrthoFinder output from all 47 species
AMTR_s00066p00148680 evm_27.TU.AmTr_v1... External stimuli response.biotic... 0.03 OrthoFinder output from all 47 species
AT1G64530 No alias Plant regulator RWP-RK family protein 0.03 OrthoFinder output from all 47 species
Ehy_g22670 NLP7 transcription factor *(NIN) & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g32098 NLP7 transcription factor *(NIN) & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g29425 NLP7 transcription factor *(NIN) & original description: none 0.04 OrthoFinder output from all 47 species
Smo118918 No alias RNA biosynthesis.transcriptional activation.NIN-like... 0.05 OrthoFinder output from all 47 species
Solyc01g112190.3.1 Solyc01g112190 transcription factor (NLP). transcription factor (NIN) 0.03 OrthoFinder output from all 47 species
Solyc08g013900.3.1 Solyc08g013900 transcription factor (NLP). transcription factor (NIN) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003677 DNA binding IEP HCCA
MF GO:0003700 DNA-binding transcription factor activity IEP HCCA
BP GO:0006355 regulation of DNA-templated transcription IEP HCCA
MF GO:0008194 UDP-glycosyltransferase activity IEP HCCA
BP GO:0009889 regulation of biosynthetic process IEP HCCA
BP GO:0010468 regulation of gene expression IEP HCCA
BP GO:0010556 regulation of macromolecule biosynthetic process IEP HCCA
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP HCCA
BP GO:0019222 regulation of metabolic process IEP HCCA
BP GO:0031323 regulation of cellular metabolic process IEP HCCA
BP GO:0031326 regulation of cellular biosynthetic process IEP HCCA
MF GO:0043565 sequence-specific DNA binding IEP HCCA
BP GO:0050789 regulation of biological process IEP HCCA
BP GO:0050794 regulation of cellular process IEP HCCA
BP GO:0051171 regulation of nitrogen compound metabolic process IEP HCCA
BP GO:0051252 regulation of RNA metabolic process IEP HCCA
BP GO:0060255 regulation of macromolecule metabolic process IEP HCCA
BP GO:0065007 biological regulation IEP HCCA
BP GO:0080090 regulation of primary metabolic process IEP HCCA
MF GO:0140110 transcription regulator activity IEP HCCA
BP GO:1903506 regulation of nucleic acid-templated transcription IEP HCCA
BP GO:2001141 regulation of RNA biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR003035 RWP-RK_dom 742 789
IPR000270 PB1_dom 1094 1172
No external refs found!