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  5. Dde_g09775

Dde_g09775


Description : not classified & original description: none


Gene families : OG0001104 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001104_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Dde_g09775
Cluster HCCA: Cluster_21

Target Alias Description ECC score Gene Family Method Actions
Adi_g015741 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Adi_g089268 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g13606 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g14119 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g09139 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g14176 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g17130 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.01G061400.1 Ceric.01G061400 not classified & original description: pacid=50592672... 0.03 OrthoFinder output from all 47 species
Ceric.11G091600.1 Ceric.11G091600 not classified & original description: pacid=50596008... 0.03 OrthoFinder output from all 47 species
Ceric.19G017900.1 Ceric.19G017900 not classified & original description: pacid=50576444... 0.03 OrthoFinder output from all 47 species
Dac_g22799 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01019029001 No alias Pentatricopeptide repeat-containing protein At2g01390... 0.03 OrthoFinder output from all 47 species
GSVIVT01019040001 No alias Pentatricopeptide repeat-containing protein At5g66631... 0.02 OrthoFinder output from all 47 species
Gb_36347 No alias Pentatricopeptide repeat-containing protein At5g66631... 0.03 OrthoFinder output from all 47 species
Len_g17138 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g02323 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Lfl_g27946 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
MA_89328g0010 No alias Pentatricopeptide repeat-containing protein At5g66631... 0.02 OrthoFinder output from all 47 species
Msp_g06308 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Nbi_g19603 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g09735 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g59517 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g32274 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0006.g003004 No alias not classified & original description: CDS=1-2094 0.03 OrthoFinder output from all 47 species
Sam_g25243 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Solyc02g065510.1.1 Solyc02g065510 Pentatricopeptide repeat-containing protein At5g66631... 0.02 OrthoFinder output from all 47 species
Tin_g11870 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Tin_g13511 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g19487 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003968 RNA-dependent RNA polymerase activity IEP HCCA
MF GO:0003993 acid phosphatase activity IEP HCCA
MF GO:0004659 prenyltransferase activity IEP HCCA
BP GO:0006164 purine nucleotide biosynthetic process IEP HCCA
BP GO:0006188 IMP biosynthetic process IEP HCCA
BP GO:0006189 'de novo' IMP biosynthetic process IEP HCCA
MF GO:0008318 protein prenyltransferase activity IEP HCCA
BP GO:0009123 nucleoside monophosphate metabolic process IEP HCCA
BP GO:0009124 nucleoside monophosphate biosynthetic process IEP HCCA
BP GO:0009126 purine nucleoside monophosphate metabolic process IEP HCCA
BP GO:0009127 purine nucleoside monophosphate biosynthetic process IEP HCCA
BP GO:0009152 purine ribonucleotide biosynthetic process IEP HCCA
BP GO:0009156 ribonucleoside monophosphate biosynthetic process IEP HCCA
BP GO:0009161 ribonucleoside monophosphate metabolic process IEP HCCA
BP GO:0009165 nucleotide biosynthetic process IEP HCCA
BP GO:0009167 purine ribonucleoside monophosphate metabolic process IEP HCCA
BP GO:0009168 purine ribonucleoside monophosphate biosynthetic process IEP HCCA
BP GO:0009260 ribonucleotide biosynthetic process IEP HCCA
MF GO:0016765 transferase activity, transferring alkyl or aryl (other than methyl) groups IEP HCCA
MF GO:0016779 nucleotidyltransferase activity IEP HCCA
MF GO:0016791 phosphatase activity IEP HCCA
BP GO:0018342 protein prenylation IEP HCCA
MF GO:0034062 5'-3' RNA polymerase activity IEP HCCA
MF GO:0042578 phosphoric ester hydrolase activity IEP HCCA
BP GO:0046040 IMP metabolic process IEP HCCA
BP GO:0046390 ribose phosphate biosynthetic process IEP HCCA
BP GO:0072522 purine-containing compound biosynthetic process IEP HCCA
BP GO:0097354 prenylation IEP HCCA
MF GO:0097747 RNA polymerase activity IEP HCCA
BP GO:1901137 carbohydrate derivative biosynthetic process IEP HCCA
BP GO:1901293 nucleoside phosphate biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR033443 PPR_long 511 663
IPR002885 Pentatricopeptide_repeat 256 305
IPR002885 Pentatricopeptide_repeat 178 233
No external refs found!