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  5. Dde_g07199

Dde_g07199


Description : component *(uL10) of large ribosomal-subunit (LSU) proteome & original description: none


Gene families : OG0002053 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002053_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Dde_g07199

Target Alias Description ECC score Gene Family Method Actions
AT3G11250 No alias Ribosomal protein L10 family protein 0.02 OrthoFinder output from all 47 species
Aop_g13520 No alias component *(uL10) of large ribosomal-subunit (LSU)... 0.05 OrthoFinder output from all 47 species
Azfi_s0492.g073531 No alias component *(uL10) of large ribosomal-subunit (LSU)... 0.05 OrthoFinder output from all 47 species
Cpa|evm.model.tig00000615.69 No alias Protein biosynthesis.cytosolic ribosome.large subunit... 0.02 OrthoFinder output from all 47 species
Cre12.g520500 No alias Protein biosynthesis.cytosolic ribosome.large subunit... 0.03 OrthoFinder output from all 47 species
Dac_g01446 No alias component *(uL10) of large ribosomal-subunit (LSU)... 0.06 OrthoFinder output from all 47 species
Ehy_g02367 No alias component *(uL10) of large ribosomal-subunit (LSU)... 0.03 OrthoFinder output from all 47 species
LOC_Os08g03640.1 LOC_Os08g03640 component RPP0 of LSU proteome component 0.02 OrthoFinder output from all 47 species
LOC_Os12g03880.1 LOC_Os12g03880 component RPP0 of LSU proteome component 0.02 OrthoFinder output from all 47 species
MA_10433058g0020 No alias component RPP0 of LSU proteome component 0.06 OrthoFinder output from all 47 species
Mp1g07120.1 No alias component RPP0 of LSU proteome component 0.03 OrthoFinder output from all 47 species
Pp3c11_3700V3.1 Pp3c11_3700 Ribosomal protein L10 family protein 0.01 OrthoFinder output from all 47 species
Sam_g09753 No alias component *(uL10) of large ribosomal-subunit (LSU)... 0.03 OrthoFinder output from all 47 species
Solyc05g054580.3.1 Solyc05g054580 component RPP0 of LSU proteome component 0.04 OrthoFinder output from all 47 species
Zm00001e021786_P001 Zm00001e021786 component RPP0 of LSU proteome component 0.03 OrthoFinder output from all 47 species
Zm00001e029292_P001 Zm00001e029292 component RPP0 of LSU proteome component 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003723 RNA binding IEP HCCA
MF GO:0003968 RNA-dependent RNA polymerase activity IEP HCCA
MF GO:0004175 endopeptidase activity IEP HCCA
MF GO:0004222 metalloendopeptidase activity IEP HCCA
MF GO:0005315 inorganic phosphate transmembrane transporter activity IEP HCCA
BP GO:0006817 phosphate ion transport IEP HCCA
MF GO:0008237 metallopeptidase activity IEP HCCA
MF GO:0015291 secondary active transmembrane transporter activity IEP HCCA
MF GO:0015318 inorganic molecular entity transmembrane transporter activity IEP HCCA
BP GO:0015698 inorganic anion transport IEP HCCA
MF GO:0016779 nucleotidyltransferase activity IEP HCCA
MF GO:0022804 active transmembrane transporter activity IEP HCCA
MF GO:0034062 5'-3' RNA polymerase activity IEP HCCA
MF GO:0044183 protein folding chaperone IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:0097747 RNA polymerase activity IEP HCCA
MF GO:0140098 catalytic activity, acting on RNA IEP HCCA
MF GO:0140640 catalytic activity, acting on a nucleic acid IEP HCCA
MF GO:0140662 ATP-dependent protein folding chaperone IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
InterPro domains Description Start Stop
IPR001790 Ribosomal_L10P 8 108
IPR040637 RL10P_insert 114 183
No external refs found!