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  5. Dde_g05383

Dde_g05383


Description : not classified & original description: none


Gene families : OG0000043 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Dde_g05383
Cluster HCCA: Cluster_37

Target Alias Description ECC score Gene Family Method Actions
Adi_g055309 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g057084 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g065636 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g02562 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g06418 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g18533 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g26639 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g05715 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g07076 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g07485 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g30586 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g30870 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g55312 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g21145 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g26474 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g31319 No alias ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0063.g035389 No alias not classified & original description: CDS=1-2073 0.04 OrthoFinder output from all 47 species
Azfi_s0131.g049164 No alias not classified & original description: CDS=1-2763 0.02 OrthoFinder output from all 47 species
Azfi_s0250.g060258 No alias not classified & original description: CDS=1-1893 0.02 OrthoFinder output from all 47 species
Azfi_s0345.g065805 No alias not classified & original description: CDS=1-2679 0.02 OrthoFinder output from all 47 species
Azfi_s0469.g072874 CRR22 not classified & original description: CDS=1-1206 0.02 OrthoFinder output from all 47 species
Azfi_s1399.g102577 No alias not classified & original description: CDS=1-951 0.02 OrthoFinder output from all 47 species
Cba_g05975 No alias ssDNA-binding protein *(OSB) & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g07278 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g07456 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g07540 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g07653 VAC1, ECB2, ATECB2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g20866 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g35200 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g67250 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g67479 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g74875 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g75123 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.03G030900.1 CRR22, Ceric.03G030900 not classified & original description: pacid=50573050... 0.03 OrthoFinder output from all 47 species
Ceric.11G090500.1 Ceric.11G090500 not classified & original description: pacid=50596019... 0.04 OrthoFinder output from all 47 species
Ceric.11G091700.1 Ceric.11G091700 ssDNA-binding protein *(OSB) & original description:... 0.03 OrthoFinder output from all 47 species
Ceric.29G083700.1 Ceric.29G083700 not classified & original description: pacid=50625623... 0.03 OrthoFinder output from all 47 species
Ceric.34G015500.1 OTP84, Ceric.34G015500 not classified & original description: pacid=50623596... 0.03 OrthoFinder output from all 47 species
Ceric.37G017500.1 VAC1, ECB2,... ssDNA-binding protein *(OSB) & original description:... 0.04 OrthoFinder output from all 47 species
Ceric.37G043200.1 Ceric.37G043200 not classified & original description: pacid=50616612... 0.02 OrthoFinder output from all 47 species
Dac_g08463 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g01720 OTP84 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g02401 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g36063 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g43569 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g48263 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g09251 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g12066 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g14206 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g17374 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g19876 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Len_g20657 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g58364 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g03441 VAC1, ECB2, ATECB2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g05672 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g05695 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g05736 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g27953 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g01227 CRR22 ssDNA-binding protein *(OSB) & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g21594 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g24031 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Msp_g31826 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g40828 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g45899 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Nbi_g17001 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Nbi_g18405 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g25433 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g18621 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g64508 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g03867 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g03887 VAC1, ECB2, ATECB2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g18662 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g31291 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g41462 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g07064 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g23060 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g08784 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g17848 OTP86 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g18788 No alias ssDNA-binding protein *(OSB) & original description: none 0.05 OrthoFinder output from all 47 species
Tin_g09995 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g22019 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g34089 No alias ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004175 endopeptidase activity IEP HCCA
MF GO:0004252 serine-type endopeptidase activity IEP HCCA
BP GO:0006259 DNA metabolic process IEP HCCA
BP GO:0006281 DNA repair IEP HCCA
BP GO:0006284 base-excision repair IEP HCCA
BP GO:0006465 signal peptide processing IEP HCCA
BP GO:0006725 cellular aromatic compound metabolic process IEP HCCA
BP GO:0006974 cellular response to DNA damage stimulus IEP HCCA
MF GO:0008236 serine-type peptidase activity IEP HCCA
BP GO:0010024 phytochromobilin biosynthetic process IEP HCCA
BP GO:0016053 organic acid biosynthetic process IEP HCCA
BP GO:0016485 protein processing IEP HCCA
MF GO:0016627 oxidoreductase activity, acting on the CH-CH group of donors IEP HCCA
MF GO:0016636 oxidoreductase activity, acting on the CH-CH group of donors, iron-sulfur protein as acceptor IEP HCCA
MF GO:0017171 serine hydrolase activity IEP HCCA
BP GO:0033013 tetrapyrrole metabolic process IEP HCCA
BP GO:0033014 tetrapyrrole biosynthetic process IEP HCCA
BP GO:0033554 cellular response to stress IEP HCCA
BP GO:0043648 dicarboxylic acid metabolic process IEP HCCA
BP GO:0043650 dicarboxylic acid biosynthetic process IEP HCCA
BP GO:0046394 carboxylic acid biosynthetic process IEP HCCA
BP GO:0046483 heterocycle metabolic process IEP HCCA
MF GO:0046914 transition metal ion binding IEP HCCA
MF GO:0050897 cobalt ion binding IEP HCCA
BP GO:0051202 phytochromobilin metabolic process IEP HCCA
BP GO:0051604 protein maturation IEP HCCA
BP GO:0051716 cellular response to stimulus IEP HCCA
BP GO:1901360 organic cyclic compound metabolic process IEP HCCA
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 220 243
IPR002885 Pentatricopeptide_repeat 56 74
IPR002885 Pentatricopeptide_repeat 711 732
IPR002885 Pentatricopeptide_repeat 826 853
IPR002885 Pentatricopeptide_repeat 854 878
IPR002885 Pentatricopeptide_repeat 622 652
IPR002885 Pentatricopeptide_repeat 481 504
IPR002885 Pentatricopeptide_repeat 390 438
IPR002885 Pentatricopeptide_repeat 951 998
IPR002885 Pentatricopeptide_repeat 148 193
IPR002885 Pentatricopeptide_repeat 247 294
IPR002885 Pentatricopeptide_repeat 735 776
IPR002885 Pentatricopeptide_repeat 507 554
No external refs found!