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Aliases : OTP86
Description : not classified & original description: none
Gene families : OG0000000 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AMTR_s00003p00175270 | evm_27.TU.AmTr_v1... | Pentatricopeptide repeat-containing protein At1g31790... | 0.03 | OrthoFinder output from all 47 species | |
| AMTR_s00057p00087430 | evm_27.TU.AmTr_v1... | Pentatricopeptide repeat-containing protein At2g27610... | 0.02 | OrthoFinder output from all 47 species | |
| AMTR_s00065p00031420 | evm_27.TU.AmTr_v1... | Pentatricopeptide repeat-containing protein At2g33680... | 0.02 | OrthoFinder output from all 47 species | |
| AT1G25360 | No alias | Pentatricopeptide repeat (PPR) superfamily protein | 0.03 | OrthoFinder output from all 47 species | |
| AT1G77010 | No alias | Pentatricopeptide repeat (PPR) superfamily protein | 0.04 | OrthoFinder output from all 47 species | |
| Adi_g067302 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Adi_g081792 | CRR22 | ssDNA-binding protein *(OSB) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Adi_g099297 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Aev_g32627 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ala_g12581 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Ala_g24099 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Als_g18037 | OTP84 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Als_g18398 | OTP86 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Als_g19295 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Als_g19798 | CRR22 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Als_g61024 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aob_g11093 | CRR22 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aop_g03164 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Azfi_s0010.g012027 | No alias | not classified & original description: CDS=1-2859 | 0.03 | OrthoFinder output from all 47 species | |
| Azfi_s0028.g023864 | No alias | not classified & original description: CDS=1-2211 | 0.03 | OrthoFinder output from all 47 species | |
| Azfi_s0245.g060017 | No alias | not classified & original description: CDS=1-2076 | 0.02 | OrthoFinder output from all 47 species | |
| Azfi_s3922.g117339 | No alias | not classified & original description: CDS=1-831 | 0.02 | OrthoFinder output from all 47 species | |
| Ceric.04G002600.1 | Ceric.04G002600 | not classified & original description: pacid=50631990... | 0.03 | OrthoFinder output from all 47 species | |
| Ceric.1Z003200.1 | Ceric.1Z003200 | not classified & original description: pacid=50628145... | 0.03 | OrthoFinder output from all 47 species | |
| Ceric.23G012500.1 | Ceric.23G012500 | not classified & original description: pacid=50610998... | 0.03 | OrthoFinder output from all 47 species | |
| Ceric.35G007000.1 | Ceric.35G007000 | not classified & original description: pacid=50581130... | 0.03 | OrthoFinder output from all 47 species | |
| Ceric.39G043600.1 | Ceric.39G043600 | not classified & original description: pacid=50582616... | 0.03 | OrthoFinder output from all 47 species | |
| Cre12.g483700 | OSB4 | Cell cycle.organelle machineries.DNA... | 0.02 | OrthoFinder output from all 47 species | |
| Dcu_g49213 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ehy_g12413 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ehy_g25136 | CRR2 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ehy_g26396 | OTP84 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ehy_g29335 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| GSVIVT01030836001 | No alias | Putative pentatricopeptide repeat-containing protein... | 0.02 | OrthoFinder output from all 47 species | |
| GSVIVT01037377001 | OTP82 | Pentatricopeptide repeat-containing protein At1g08070,... | 0.02 | OrthoFinder output from all 47 species | |
| LOC_Os02g44480.1 | LOC_Os02g44480 | Pentatricopeptide repeat-containing protein At5g39350... | 0.02 | OrthoFinder output from all 47 species | |
| LOC_Os04g14450.1 | LOC_Os04g14450 | Pentatricopeptide repeat-containing protein At4g14820... | 0.02 | OrthoFinder output from all 47 species | |
| Len_g04816 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Len_g18022 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Len_g33406 | OTP84 | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Lfl_g04822 | CRR2 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Lfl_g07381 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| MA_77675g0010 | No alias | Pentatricopeptide repeat-containing protein At4g13650... | 0.02 | OrthoFinder output from all 47 species | |
| MA_8319g0010 | CRR2 | Pentatricopeptide repeat-containing protein At3g24000,... | 0.02 | OrthoFinder output from all 47 species | |
| Msp_g17699 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Msp_g26512 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Msp_g34503 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Nbi_g03798 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Nbi_g40764 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Ore_g06871 | No alias | ssDNA-binding protein *(OSB) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ore_g14351 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ore_g18088 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ore_g23510 | CRR22 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ore_g32582 | EMB2261 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Pir_g04351 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Pir_g57470 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Pir_g60210 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ppi_g03628 | REME1 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ppi_g14215 | VAC1, ECB2, ATECB2 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ppi_g18881 | CRR22 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ppi_g40056 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ppi_g44900 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Ppi_g56244 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ppi_g59317 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ppi_g61155 | No alias | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0013.g005803 | No alias | not classified & original description: CDS=32-2446 | 0.03 | OrthoFinder output from all 47 species | |
| Sam_g13588 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Sam_g39629 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Sam_g45773 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Smo110980 | OTP82 | Putative pentatricopeptide repeat-containing protein... | 0.03 | OrthoFinder output from all 47 species | |
| Solyc07g008890.3.1 | Solyc07g008890 | Pentatricopeptide repeat-containing protein At4g33170... | 0.02 | OrthoFinder output from all 47 species | |
| Spa_g55586 | No alias | ssDNA-binding protein *(OSB) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Tin_g08446 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Tin_g38826 | REME1 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Zm00001e008200_P001 | Zm00001e008200 | Pentatricopeptide repeat-containing protein At4g13650... | 0.02 | OrthoFinder output from all 47 species | |
| Zm00001e039394_P003 | Zm00001e039394 | Pentatricopeptide repeat-containing protein At5g04780,... | 0.02 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| CC | GO:0000123 | histone acetyltransferase complex | IEP | HCCA |
| MF | GO:0003723 | RNA binding | IEP | HCCA |
| MF | GO:0003779 | actin binding | IEP | HCCA |
| CC | GO:0005575 | cellular_component | IEP | HCCA |
| CC | GO:0005634 | nucleus | IEP | HCCA |
| CC | GO:0005737 | cytoplasm | IEP | HCCA |
| BP | GO:0006396 | RNA processing | IEP | HCCA |
| BP | GO:0006397 | mRNA processing | IEP | HCCA |
| BP | GO:0006644 | phospholipid metabolic process | IEP | HCCA |
| MF | GO:0008092 | cytoskeletal protein binding | IEP | HCCA |
| BP | GO:0008610 | lipid biosynthetic process | IEP | HCCA |
| BP | GO:0008654 | phospholipid biosynthetic process | IEP | HCCA |
| BP | GO:0016071 | mRNA metabolic process | IEP | HCCA |
| MF | GO:0016772 | transferase activity, transferring phosphorus-containing groups | IEP | HCCA |
| MF | GO:0016779 | nucleotidyltransferase activity | IEP | HCCA |
| MF | GO:0016780 | phosphotransferase activity, for other substituted phosphate groups | IEP | HCCA |
| CC | GO:0031248 | protein acetyltransferase complex | IEP | HCCA |
| BP | GO:0044255 | cellular lipid metabolic process | IEP | HCCA |
| CC | GO:0070461 | SAGA-type complex | IEP | HCCA |
| BP | GO:0090407 | organophosphate biosynthetic process | IEP | HCCA |
| CC | GO:0140535 | intracellular protein-containing complex | IEP | HCCA |
| CC | GO:1902493 | acetyltransferase complex | IEP | HCCA |
| CC | GO:1990234 | transferase complex | IEP | HCCA |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR002885 | Pentatricopeptide_repeat | 97 | 123 |
| IPR002885 | Pentatricopeptide_repeat | 468 | 485 |
| IPR002885 | Pentatricopeptide_repeat | 269 | 294 |
| IPR002885 | Pentatricopeptide_repeat | 395 | 424 |
| IPR002885 | Pentatricopeptide_repeat | 668 | 688 |
| IPR002885 | Pentatricopeptide_repeat | 594 | 641 |
| IPR002885 | Pentatricopeptide_repeat | 194 | 238 |
| IPR002885 | Pentatricopeptide_repeat | 493 | 541 |
| IPR002885 | Pentatricopeptide_repeat | 295 | 342 |
| No external refs found! |