Dde_g04417


Description : not classified & original description: none


Gene families : OG0000000 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Dde_g04417
Cluster HCCA: Cluster_40

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00040p00174700 evm_27.TU.AmTr_v1... Pentatricopeptide repeat-containing protein At4g13650... 0.03 OrthoFinder output from all 47 species
Adi_g004351 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g005523 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g011562 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g069101 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g097113 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g098810 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g099224 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g100991 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g104520 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g12445 OTP84 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g13671 DOT4 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g16844 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ala_g16849 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ala_g17255 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g17267 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g17609 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ala_g17662 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g20749 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g23929 OTP86 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g25155 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Ala_g25745 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g30723 REME1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g36020 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ala_g36188 CRR22 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g36206 No alias ssDNA-binding protein *(OSB) & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g36522 CRR22 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aob_g17417 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g02020 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g02588 EMB2758 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g03219 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g04118 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g06167 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g09002 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g11906 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g16119 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g16182 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g16657 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aop_g16784 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g17269 CRR22 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g19645 CRR2 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g23672 CRR2 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g23762 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g23791 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g26859 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g31176 LPA66 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g32926 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g33090 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g35712 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g36623 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g59647 OTP84 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g63229 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g67765 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g67880 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g68098 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g69562 OTP86 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0001.g000621 No alias ssDNA-binding protein *(OSB) & original description: CDS=97-654 0.03 OrthoFinder output from all 47 species
Ceric.03G027500.1 Ceric.03G027500 not classified & original description: pacid=50572299... 0.04 OrthoFinder output from all 47 species
Ceric.12G034200.1 OTP84, Ceric.12G034200 not classified & original description: pacid=50601806... 0.04 OrthoFinder output from all 47 species
Ceric.20G015100.1 Ceric.20G015100 not classified & original description: pacid=50567311... 0.04 OrthoFinder output from all 47 species
Ceric.20G040800.1 OTP86, Ceric.20G040800 not classified & original description: pacid=50566943... 0.03 OrthoFinder output from all 47 species
Ceric.27G067100.1 CRR22, Ceric.27G067100 not classified & original description: pacid=50605115... 0.03 OrthoFinder output from all 47 species
Ceric.28G068300.1 DOT4, Ceric.28G068300 not classified & original description: pacid=50570176... 0.03 OrthoFinder output from all 47 species
Ceric.29G081800.1 VAC1, ECB2,... not classified & original description: pacid=50624309... 0.03 OrthoFinder output from all 47 species
Dac_g04259 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g04715 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g19058 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dac_g30156 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dac_g33128 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g15725 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
LOC_Os03g43420.1 OSB1, LOC_Os03g43420 ssDNA-binding protein (OSB) 0.02 OrthoFinder output from all 47 species
LOC_Os10g34720.1 LOI1, MEF11,... Putative pentatricopeptide repeat-containing protein... 0.03 OrthoFinder output from all 47 species
Len_g03238 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Len_g03293 EMB2758 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Len_g04722 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g17356 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Len_g18274 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g18973 OTP84 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g18985 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Len_g19007 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Len_g19018 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g34151 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Lfl_g05478 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g06227 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g06746 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g07751 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g07814 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g15674 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g16815 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g37537 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g37539 VAC1, ECB2, ATECB2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
MA_94165g0010 CRR22 Pentatricopeptide repeat-containing protein At1g11290,... 0.02 OrthoFinder output from all 47 species
Msp_g02751 CRR22 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g14089 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g14901 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Msp_g17457 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Msp_g17695 EMB2758 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g19370 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Msp_g21793 EMB2758 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g22779 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g26081 MEF9 ssDNA-binding protein *(OSB) & original description: none 0.05 OrthoFinder output from all 47 species
Msp_g30522 OTP81 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g34019 No alias ssDNA-binding protein *(OSB) & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g34481 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Msp_g34536 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g47042 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Nbi_g04960 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g10028 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g20199 OTP86 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Nbi_g24038 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g38282 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Nbi_g41053 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g03334 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g03361 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g03406 OTP84 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g03407 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g12561 No alias ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g44175 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g57327 CRR22 ssDNA-binding protein *(OSB) & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g57692 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g63497 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g63824 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g63828 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g64859 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g04603 CRR22 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g04624 DOT4 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g04704 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g05156 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g06849 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ppi_g07011 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g07527 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ppi_g11638 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g15635 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g18166 VAC1, ECB2, ATECB2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g29449 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g35982 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g53593 DOT4 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g53945 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g55770 MEF22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g59100 OTP84 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g59340 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g62956 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Sam_g10477 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g12231 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g27561 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g27788 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g30280 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g39953 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g48865 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g01958 EMB2758 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g05652 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g06017 CRR22 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g07311 EMB2758 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g08057 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g08299 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g08776 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Spa_g10971 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g12114 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g12946 CRR22 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g13637 EMB2758 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g14151 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g14169 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g14314 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g15467 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g18556 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g20033 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g20177 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Spa_g21394 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g21942 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g23978 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Spa_g24109 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g27671 No alias ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g31130 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g44754 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Spa_g44833 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g46182 OTP82 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g48473 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g51106 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g52133 No alias ssDNA-binding protein *(OSB) & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g53894 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g56798 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g57230 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g06539 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Tin_g10336 EMB2758 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g11856 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g13065 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g17626 DOT4 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g29860 EMB2758 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g30037 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g30138 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g30968 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g31905 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g35624 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Zm00001e033826_P001 Zm00001e033826 Pentatricopeptide repeat-containing protein At4g02750... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
BP GO:0000375 RNA splicing, via transesterification reactions IEP HCCA
BP GO:0000377 RNA splicing, via transesterification reactions with bulged adenosine as nucleophile IEP HCCA
BP GO:0000398 mRNA splicing, via spliceosome IEP HCCA
MF GO:0003690 double-stranded DNA binding IEP HCCA
BP GO:0006396 RNA processing IEP HCCA
BP GO:0006397 mRNA processing IEP HCCA
BP GO:0008380 RNA splicing IEP HCCA
BP GO:0016071 mRNA metabolic process IEP HCCA
CC GO:0030532 small nuclear ribonucleoprotein complex IEP HCCA
CC GO:0046540 U4/U6 x U5 tri-snRNP complex IEP HCCA
CC GO:0097525 spliceosomal snRNP complex IEP HCCA
CC GO:0097526 spliceosomal tri-snRNP complex IEP HCCA
CC GO:0120114 Sm-like protein family complex IEP HCCA
CC GO:0140513 nuclear protein-containing complex IEP HCCA
CC GO:1990904 ribonucleoprotein complex IEP HCCA
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 634 658
IPR002885 Pentatricopeptide_repeat 330 352
IPR002885 Pentatricopeptide_repeat 534 556
IPR002885 Pentatricopeptide_repeat 228 248
IPR002885 Pentatricopeptide_repeat 356 402
IPR002885 Pentatricopeptide_repeat 254 300
IPR002885 Pentatricopeptide_repeat 560 607
IPR002885 Pentatricopeptide_repeat 152 198
IPR002885 Pentatricopeptide_repeat 458 504
No external refs found!