Aliases : HSFB4, SCZ, AT-HSFB4
Description : HSF-type transcription factor & original description: none
Gene families : OG0000093 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000093_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | HRR: Dde_g04305 | |
Cluster | HCCA: Cluster_15 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
Aev_g18842 | HSFA1B, ATHSF3,... | transcriptional regulator *(HsfA1) & original description: none | 0.05 | OrthoFinder output from all 47 species | |
Als_g30082 | HSFA1B, ATHSF3,... | HSF-type transcription factor & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Aspi01Gene30579.t1 | HSFA1B, ATHSF3,... | HSF-type transcription factor & original description: none | 0.04 | OrthoFinder output from all 47 species | |
Azfi_s0011.g012606 | AT-HSFA6B, HSFA6B | HSF-type transcription factor & original description: CDS=1-1191 | 0.02 | OrthoFinder output from all 47 species | |
LOC_Os02g32590.1 | HSFA3, AT-HSFA3,... | transcription factor (HSF) | 0.03 | OrthoFinder output from all 47 species | |
LOC_Os03g06630.1 | AT-HSFA6B,... | transcription factor (HSF) | 0.03 | OrthoFinder output from all 47 species | |
LOC_Os05g45410.1 | HSF A4A,... | transcription factor (HSF) | 0.02 | OrthoFinder output from all 47 species | |
Pnu_g08271 | HSFA1B, ATHSF3,... | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
Sacu_v1.1_s0001.g000353 | HSFA1E, ATHSFA1E | HSF-type transcription factor & original description:... | 0.02 | OrthoFinder output from all 47 species | |
Tin_g20054 | AT-HSFA6B, HSFA6B | HSF-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Tin_g20093 | ATHSF1, HSF1,... | HSF-type transcription factor & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Zm00001e009944_P001 | HSF4, HSFB1,... | transcription factor (HSF) | 0.02 | OrthoFinder output from all 47 species | |
Zm00001e034345_P001 | HSF4, HSFB1,... | transcription factor (HSF) | 0.02 | OrthoFinder output from all 47 species |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0003700 | DNA-binding transcription factor activity | IEA | Interproscan |
BP | GO:0006355 | regulation of DNA-templated transcription | IEA | Interproscan |
MF | GO:0043565 | sequence-specific DNA binding | IEA | Interproscan |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0016701 | oxidoreductase activity, acting on single donors with incorporation of molecular oxygen | IEP | HCCA |
MF | GO:0016702 | oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen | IEP | HCCA |
MF | GO:0051213 | dioxygenase activity | IEP | HCCA |
InterPro domains | Description | Start | Stop |
---|---|---|---|
IPR000232 | HSF_DNA-bd | 47 | 136 |
No external refs found! |