Dde_g00993

Description : component *(RINGLET/RLT) of ISWI chromatin remodeling complex & original description: none

Gene families : OG0001590 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001590_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Dde_g00993

Target	Alias	Description	ECC score	Gene Family Method
Adi_g012033	HB-1	component *(RINGLET/RLT) of ISWI chromatin remodeling...	0.04	OrthoFinder output from all 47 species
Aob_g21500	No alias	component *(RINGLET/RLT) of ISWI chromatin remodeling...	0.02	OrthoFinder output from all 47 species
Aspi01Gene65117.t1	Aspi01Gene65117	component *(RINGLET/RLT) of ISWI chromatin remodeling...	0.06	OrthoFinder output from all 47 species
Ceric.16G048200.1	HB-1, Ceric.16G048200	component *(RINGLET/RLT) of ISWI chromatin remodeling...	0.04	OrthoFinder output from all 47 species
Ceric.38G016400.1	Ceric.38G016400	component *(RINGLET/RLT) of ISWI chromatin remodeling...	0.03	OrthoFinder output from all 47 species
Cre03.g174500	No alias	Homeobox-DDT domain protein RLT1 OS=Arabidopsis thaliana	0.01	OrthoFinder output from all 47 species
Dcu_g48258	HB-1	component *(RINGLET/RLT) of ISWI chromatin remodeling...	0.03	OrthoFinder output from all 47 species
Ehy_g16445	No alias	component *(RINGLET/RLT) of ISWI chromatin remodeling...	0.05	OrthoFinder output from all 47 species
GSVIVT01020605001	No alias	RNA biosynthesis.transcriptional activation.HB...	0.02	OrthoFinder output from all 47 species
LOC_Os05g48820.1	LOC_Os05g48820	HOX-like transcription factor	0.04	OrthoFinder output from all 47 species
LOC_Os07g42750.1	LOC_Os07g42750	Homeobox-DDT domain protein RLT3 OS=Arabidopsis thaliana...	0.03	OrthoFinder output from all 47 species
Lfl_g10310	No alias	component *(RINGLET/RLT) of ISWI chromatin remodeling...	0.04	OrthoFinder output from all 47 species
MA_2434g0010	No alias	HOX-like transcription factor	0.03	OrthoFinder output from all 47 species
Ore_g29882	No alias	component *(RINGLET/RLT) of ISWI chromatin remodeling...	0.03	OrthoFinder output from all 47 species
Pir_g65963	No alias	component *(RINGLET/RLT) of ISWI chromatin remodeling...	0.03	OrthoFinder output from all 47 species
Sam_g25993	No alias	component *(RINGLET/RLT) of ISWI chromatin remodeling...	0.05	OrthoFinder output from all 47 species
Solyc11g006200.2.1	Solyc11g006200	Homeobox-DDT domain protein RLT3 OS=Arabidopsis thaliana...	0.03	OrthoFinder output from all 47 species
Spa_g09105	HB-1	component *(RINGLET/RLT) of ISWI chromatin remodeling...	0.03	OrthoFinder output from all 47 species
Zm00001e006057_P001	Zm00001e006057	Homeobox-DDT domain protein RLT3 OS=Arabidopsis thaliana...	0.03	OrthoFinder output from all 47 species
Zm00001e020198_P001	HB-1, Zm00001e020198	HOX-like transcription factor	0.03	OrthoFinder output from all 47 species
Zm00001e026524_P003	Zm00001e026524	HOX-like transcription factor	0.03	OrthoFinder output from all 47 species
Zm00001e028032_P001	Zm00001e028032	HOX-like transcription factor	0.05	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
BP	GO:0006355	regulation of DNA-templated transcription	IEA	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0004175	endopeptidase activity	IEP	HCCA
MF	GO:0004176	ATP-dependent peptidase activity	IEP	HCCA
MF	GO:0004222	metalloendopeptidase activity	IEP	HCCA
MF	GO:0005524	ATP binding	IEP	HCCA
BP	GO:0006508	proteolysis	IEP	HCCA
BP	GO:0006996	organelle organization	IEP	HCCA
BP	GO:0007030	Golgi organization	IEP	HCCA
MF	GO:0008233	peptidase activity	IEP	HCCA
MF	GO:0008236	serine-type peptidase activity	IEP	HCCA
MF	GO:0008237	metallopeptidase activity	IEP	HCCA
MF	GO:0016787	hydrolase activity	IEP	HCCA
MF	GO:0017171	serine hydrolase activity	IEP	HCCA
MF	GO:0030554	adenyl nucleotide binding	IEP	HCCA
MF	GO:0032553	ribonucleotide binding	IEP	HCCA
MF	GO:0032555	purine ribonucleotide binding	IEP	HCCA
MF	GO:0032559	adenyl ribonucleotide binding	IEP	HCCA
MF	GO:0035639	purine ribonucleoside triphosphate binding	IEP	HCCA
MF	GO:0097367	carbohydrate derivative binding	IEP	HCCA
MF	GO:0140096	catalytic activity, acting on a protein	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR028942	WHIM1_dom	871	909
IPR018501	DDT_dom	476	530
IPR007759	Asxl_HARE-HTH	654	722
IPR028941	WHIM2_dom	1035	1107

External Links

No external refs found!

Dde_g00993

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation