Aliases : ATEP3, EP3, CHIV, ATCHITIV
Description : not classified & original description: none
Gene families : OG0000280 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000280_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | HRR: Lfl_g15813 | |
Cluster | HCCA: Cluster_135 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
AMTR_s00001p00240800 | evm_27.TU.AmTr_v1... | Basic endochitinase A OS=Secale cereale | 0.03 | OrthoFinder output from all 47 species | |
AT4G01700 | No alias | Chitinase family protein | 0.03 | OrthoFinder output from all 47 species | |
Als_g36519 | HCHIB, B-CHI,... | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Azfi_s0001.g000760 | HCHIB, B-CHI,... | not classified & original description: CDS=115-894 | 0.04 | OrthoFinder output from all 47 species | |
GSVIVT01007191001 | No alias | No description available | 0.02 | OrthoFinder output from all 47 species | |
GSVIVT01038111001 | ATEP3, EP3,... | Endochitinase EP3 OS=Arabidopsis thaliana | 0.03 | OrthoFinder output from all 47 species | |
Gb_20767 | No alias | Chitinase 5 OS=Oryza sativa subsp. japonica... | 0.03 | OrthoFinder output from all 47 species | |
LOC_Os03g04060.1 | LOC_Os03g04060 | Chitinase 11 OS=Oryza sativa subsp. japonica... | 0.02 | OrthoFinder output from all 47 species | |
LOC_Os05g33130.1 | HCHIB, B-CHI,... | Chitinase 2 OS=Oryza sativa subsp. japonica... | 0.05 | OrthoFinder output from all 47 species | |
MA_18470g0040 | No alias | no hits & (original description: none) | 0.03 | OrthoFinder output from all 47 species | |
MA_191308g0010 | ATEP3, EP3,... | Chitinase 5 OS=Oryza sativa subsp. japonica... | 0.04 | OrthoFinder output from all 47 species | |
Mp4g04430.1 | HCHIB, B-CHI,... | no description available(sp|q949h3|chi1_hevbr : 210.0) | 0.01 | OrthoFinder output from all 47 species | |
Solyc10g055800.2.1 | HCHIB, B-CHI,... | Basic 30 kDa endochitinase OS=Solanum lycopersicum... | 0.03 | OrthoFinder output from all 47 species | |
Zm00001e013318_P001 | HCHIB, B-CHI,... | Chitinase 9 OS=Oryza sativa subsp. japonica... | 0.03 | OrthoFinder output from all 47 species |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0004568 | chitinase activity | IEA | Interproscan |
BP | GO:0006032 | chitin catabolic process | IEA | Interproscan |
BP | GO:0016998 | cell wall macromolecule catabolic process | IEA | Interproscan |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
CC | GO:0005634 | nucleus | IEP | HCCA |
CC | GO:0043227 | membrane-bounded organelle | IEP | HCCA |
CC | GO:0043231 | intracellular membrane-bounded organelle | IEP | HCCA |
MF | GO:0051287 | NAD binding | IEP | HCCA |
InterPro domains | Description | Start | Stop |
---|---|---|---|
IPR000726 | Glyco_hydro_19_cat | 46 | 249 |
No external refs found! |