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  5. Aop_g68075

Aop_g68075


Description : ssDNA-binding protein *(OSB) & original description: none


Gene families : OG0002372 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002372_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Aop_g68075
Cluster HCCA: Cluster_45

Target Alias Description ECC score Gene Family Method Actions
Adi_g051123 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g080317 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g097962 No alias ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g110160 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aop_g23941 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g28682 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g33549 MEF19 ssDNA-binding protein *(OSB) & original description: none 0.06 OrthoFinder output from all 47 species
Dac_g43228 No alias ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g06816 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g08392 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Dde_g50233 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Lfl_g07244 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Lfl_g08656 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g12814 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g18121 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Lfl_g23558 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g26562 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g32772 No alias ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g32864 VAC1, ECB2, ATECB2 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Lfl_g33011 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g33040 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Lfl_g35754 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g37491 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Lfl_g40075 No alias ssDNA-binding protein *(OSB) & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g10606 No alias ssDNA-binding protein *(OSB) & original description: none 0.06 OrthoFinder output from all 47 species
Msp_g28200 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Msp_g29894 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Nbi_g32623 OTP82 not classified & original description: none 0.06 OrthoFinder output from all 47 species
Pir_g02401 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g57928 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Pir_g58531 CRR21 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Sam_g25185 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g20435 VAC1, ECB2, ATECB2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g25557 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g48804 No alias ssDNA-binding protein *(OSB) & original description: none 0.05 OrthoFinder output from all 47 species
Spa_g53360 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Spa_g55945 No alias ssDNA-binding protein *(OSB) & original description: none 0.05 OrthoFinder output from all 47 species
Tin_g19797 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g27510 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Tin_g28102 No alias ssDNA-binding protein *(OSB) & original description: none 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004175 endopeptidase activity IEP HCCA
MF GO:0004252 serine-type endopeptidase activity IEP HCCA
MF GO:0008236 serine-type peptidase activity IEP HCCA
MF GO:0017171 serine hydrolase activity IEP HCCA
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 252 269
IPR002885 Pentatricopeptide_repeat 224 250
IPR002885 Pentatricopeptide_repeat 148 195
No external refs found!