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  5. Aop_g64217

Aop_g64217 (GLR3.3, ATGLR3.3)


Aliases : GLR3.3, ATGLR3.3

Description : ligand-gated cation channel *(GLR) & original description: none


Gene families : OG0000075 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000075_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Aop_g64217
Cluster HCCA: Cluster_5

Target Alias Description ECC score Gene Family Method Actions
Adi_g103473 GLR3.3, ATGLR3.3 ligand-gated cation channel *(GLR) & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g06276 GLR3.3, ATGLR3.3 ligand-gated cation channel *(GLR) & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene49377.t1 ATGLR3.5, GLR6,... ligand-gated cation channel *(GLR) & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene54296.t1 GLR3.3,... ligand-gated cation channel *(GLR) & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0035.g025628 GLR3.3, ATGLR3.3 ligand-gated cation channel *(GLR) & original... 0.02 OrthoFinder output from all 47 species
Azfi_s0038.g026130 ATGLR2.9, GLR2.9 ligand-gated cation channel *(GLR) & original... 0.03 OrthoFinder output from all 47 species
Azfi_s0038.g026158 ATGLR3.1, GLR2,... ligand-gated cation channel *(GLR) & original... 0.03 OrthoFinder output from all 47 species
Azfi_s0132.g049186 GLUR3, GLR3.4, ATGLR3.4 ligand-gated cation channel *(GLR) & original... 0.05 OrthoFinder output from all 47 species
Ceric.01G008300.1 GLUR3, GLR3.4,... ligand-gated cation channel *(GLR) & original... 0.03 OrthoFinder output from all 47 species
Ceric.01G024600.1 GLUR3, GLR3.4,... ligand-gated cation channel *(GLR) & original... 0.02 OrthoFinder output from all 47 species
Dcu_g21224 GLR3.3, ATGLR3.3 ligand-gated cation channel *(GLR) & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g36079 GLR3.3, ATGLR3.3 ligand-gated cation channel *(GLR) & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g00943 GLUR3, GLR3.4, ATGLR3.4 ligand-gated cation channel *(GLR) & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g20777 GLR3.3, ATGLR3.3 ligand-gated cation channel *(GLR) & original description: none 0.02 OrthoFinder output from all 47 species
Gb_06329 ATGLR3.5, GLR6, GLR3.5 ligand-gated cation channel (GLR) 0.03 OrthoFinder output from all 47 species
Len_g55769 ATGLR3.5, GLR6, GLR3.5 ligand-gated cation channel *(GLR) & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g16287 GLUR3, GLR3.4, ATGLR3.4 ligand-gated cation channel *(GLR) & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g31171 GLUR3, GLR3.4, ATGLR3.4 ligand-gated cation channel *(GLR) & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g43947 ATGLR3.2,... ligand-gated cation channel *(GLR) & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g01411 GLR3.3, ATGLR3.3 ligand-gated cation channel *(GLR) & original description: none 0.02 OrthoFinder output from all 47 species
Nbi_g04400 GLR3.3, ATGLR3.3 ligand-gated cation channel *(GLR) & original description: none 0.08 OrthoFinder output from all 47 species
Nbi_g26398 GLR3.3, ATGLR3.3 ligand-gated cation channel *(GLR) & original description: none 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0005.g002574 ATGLR3.5, GLR6, GLR3.5 ligand-gated cation channel *(GLR) & original... 0.07 OrthoFinder output from all 47 species
Sacu_v1.1_s0151.g023436 GLR3.3, ATGLR3.3 ligand-gated cation channel *(GLR) & original... 0.04 OrthoFinder output from all 47 species
Solyc02g082480.3.1 GLR3.6,... ligand-gated cation channel (GLR) 0.02 OrthoFinder output from all 47 species
Spa_g08422 GLR3.3, ATGLR3.3 ligand-gated cation channel *(GLR) & original description: none 0.08 OrthoFinder output from all 47 species
Tin_g08441 ATGLR3.5, GLR6, GLR3.5 ligand-gated cation channel *(GLR) & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0015276 ligand-gated monoatomic ion channel activity IEA Interproscan
CC GO:0016020 membrane IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0005507 copper ion binding IEP HCCA
CC GO:0005634 nucleus IEP HCCA
BP GO:0006325 chromatin organization IEP HCCA
BP GO:0006334 nucleosome assembly IEP HCCA
BP GO:0006338 chromatin remodeling IEP HCCA
BP GO:0006479 protein methylation IEP HCCA
MF GO:0008170 N-methyltransferase activity IEP HCCA
BP GO:0008213 protein alkylation IEP HCCA
MF GO:0008276 protein methyltransferase activity IEP HCCA
BP GO:0008610 lipid biosynthetic process IEP HCCA
MF GO:0008757 S-adenosylmethionine-dependent methyltransferase activity IEP HCCA
MF GO:0016278 lysine N-methyltransferase activity IEP HCCA
MF GO:0016279 protein-lysine N-methyltransferase activity IEP HCCA
BP GO:0016570 histone modification IEP HCCA
BP GO:0016571 histone methylation IEP HCCA
BP GO:0018022 peptidyl-lysine methylation IEP HCCA
MF GO:0018024 histone lysine N-methyltransferase activity IEP HCCA
BP GO:0018193 peptidyl-amino acid modification IEP HCCA
BP GO:0018205 peptidyl-lysine modification IEP HCCA
BP GO:0022607 cellular component assembly IEP HCCA
BP GO:0032259 methylation IEP HCCA
BP GO:0034728 nucleosome organization IEP HCCA
BP GO:0034968 histone lysine methylation IEP HCCA
MF GO:0042054 histone methyltransferase activity IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0043169 cation binding IEP HCCA
CC GO:0043227 membrane-bounded organelle IEP HCCA
CC GO:0043231 intracellular membrane-bounded organelle IEP HCCA
BP GO:0043414 macromolecule methylation IEP HCCA
BP GO:0043933 protein-containing complex organization IEP HCCA
MF GO:0046872 metal ion binding IEP HCCA
MF GO:0046914 transition metal ion binding IEP HCCA
BP GO:0065003 protein-containing complex assembly IEP HCCA
BP GO:0065004 protein-DNA complex assembly IEP HCCA
BP GO:0071824 protein-DNA complex subunit organization IEP HCCA
InterPro domains Description Start Stop
IPR001320 Iontro_rcpt_C 831 862
IPR001638 Solute-binding_3/MltF_N 505 830
IPR001828 ANF_lig-bd_rcpt 56 416
No external refs found!