MA_10434624g0020


Description : 10.8.1 cell wall.pectin*esterases.PME encodes a pectin methylesterase pectin methylesterase 2 (PME2)


Gene families : OG_01_0000075 (Gene family) Phylogenetic Tree(s): OG0000075_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR network (cutoff 100): MA_10434624g0020
Cluster HCCA cluster: Cluster_60

Target Alias Description ECC score Gene Family Method Actions
AT2G45220 No alias Plant invertase/pectin methylesterase inhibitor superfamily 0.02 Gene family
AT3G05620 No alias Plant invertase/pectin methylesterase inhibitor superfamily 0.02 Gene family
AT3G14310 ATPME3, PME3 pectin methylesterase 3 0.02 Gene family
AT4G02300 No alias Plant invertase/pectin methylesterase inhibitor superfamily 0.02 Gene family
AT5G51500 No alias Plant invertase/pectin methylesterase inhibitor superfamily 0.02 Gene family
GSVIVT01027652001 No alias 10.8.99 cell wall.pectin*esterases.misc Plant... 0.03 Gene family
LOC_Os01g15039 Os01g0254300 10.8.1 cell wall.pectin*esterases.PME Plant... 0.02 Gene family
LOC_Os07g47830 Os07g0675100 10.8.1 cell wall.pectin*esterases.PME encodes a pectin... 0.02 Gene family
LOC_Os11g08750 Os11g0192400 10.8.99 cell wall.pectin*esterases.misc Plant... 0.02 Gene family
MA_158002g0020 No alias 10.8.1 cell wall.pectin*esterases.PME pectin... 0.02 Gene family
MA_96515g0010 No alias 10.8.1 cell wall.pectin*esterases.PME ATPMEPCRB 0.02 Gene family
Solyc03g083840.3.1 Solyc03g083840.3 10.8.99 cell wall.pectin*esterases.misc Plant... 0.02 Gene family
Solyc09g075350.3.1 Solyc09g075350.3 10.8.99 cell wall.pectin*esterases.misc Plant... 0.02 Gene family

Type GO Term Name Evidence Source
MF GO:0030599 pectinesterase activity IEA InterProScan
BP GO:0042545 cell wall modification IEA InterProScan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR006501 Pectinesterase_inhib_dom 3 78
IPR000070 Pectinesterase_cat 122 357
No external refs found!