MA_10434624g0020

Description : 10.8.1 cell wall.pectin*esterases.PME encodes a pectin methylesterase pectin methylesterase 2 (PME2)

Gene families : OG_01_0000075 (Gene family) Phylogenetic Tree(s): OG0000075_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR network (cutoff 100): MA_10434624g0020
Cluster	HCCA cluster: Cluster_60

Target	Alias	Description	ECC score	Gene Family Method
AT2G45220	No alias	Plant invertase/pectin methylesterase inhibitor superfamily	0.02	Gene family
AT3G05620	No alias	Plant invertase/pectin methylesterase inhibitor superfamily	0.02	Gene family
AT3G14310	ATPME3, PME3	pectin methylesterase 3	0.02	Gene family
AT4G02300	No alias	Plant invertase/pectin methylesterase inhibitor superfamily	0.02	Gene family
AT5G51500	No alias	Plant invertase/pectin methylesterase inhibitor superfamily	0.02	Gene family
GSVIVT01027652001	No alias	10.8.99 cell wall.pectin*esterases.misc Plant...	0.03	Gene family
LOC_Os01g15039	Os01g0254300	10.8.1 cell wall.pectin*esterases.PME Plant...	0.02	Gene family
LOC_Os07g47830	Os07g0675100	10.8.1 cell wall.pectin*esterases.PME encodes a pectin...	0.02	Gene family
LOC_Os11g08750	Os11g0192400	10.8.99 cell wall.pectin*esterases.misc Plant...	0.02	Gene family
MA_158002g0020	No alias	10.8.1 cell wall.pectin*esterases.PME pectin...	0.02	Gene family
MA_96515g0010	No alias	10.8.1 cell wall.pectin*esterases.PME ATPMEPCRB	0.02	Gene family
Solyc03g083840.3.1	Solyc03g083840.3	10.8.99 cell wall.pectin*esterases.misc Plant...	0.02	Gene family
Solyc09g075350.3.1	Solyc09g075350.3	10.8.99 cell wall.pectin*esterases.misc Plant...	0.02	Gene family

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0016043	cellular component organization	None	Extended
MF	GO:0016787	hydrolase activity	None	Extended
MF	GO:0016788	hydrolase activity, acting on ester bonds	None	Extended
MF	GO:0030599	pectinesterase activity	IEA	InterProScan
BP	GO:0042545	cell wall modification	IEA	InterProScan
BP	GO:0045229	external encapsulating structure organization	None	Extended
MF	GO:0052689	carboxylic ester hydrolase activity	None	Extended
BP	GO:0071554	cell wall organization or biogenesis	None	Extended
BP	GO:0071555	cell wall organization	None	Extended
BP	GO:0071840	cellular component organization or biogenesis	None	Extended

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR006501	Pectinesterase_inhib_dom	3	78
IPR000070	Pectinesterase_cat	122	357

External Links

No external refs found!