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  5. Aop_g58326

Aop_g58326 (RRTF1)


Aliases : RRTF1

Description : subgroup ERF-X transcription factor & original description: none


Gene families : OG0000003 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Aop_g58326

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00069p00132820 RAP2.11,... External stimuli response.biotic... 0.04 OrthoFinder output from all 47 species
AMTR_s00107p00095070 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.AP2/ERF... 0.03 OrthoFinder output from all 47 species
AT1G12610 DDF1 Integrase-type DNA-binding superfamily protein 0.02 OrthoFinder output from all 47 species
AT1G12890 No alias Integrase-type DNA-binding superfamily protein 0.02 OrthoFinder output from all 47 species
AT1G77200 No alias Integrase-type DNA-binding superfamily protein 0.02 OrthoFinder output from all 47 species
AT2G44840 ATERF13, ERF13, EREBP ethylene-responsive element binding factor 13 0.02 OrthoFinder output from all 47 species
AT3G23240 ERF1, ATERF1 ethylene response factor 1 0.03 OrthoFinder output from all 47 species
AT4G17490 ERF-6-6, ERF6, ATERF6 ethylene responsive element binding factor 6 0.05 OrthoFinder output from all 47 species
AT4G31060 No alias Integrase-type DNA-binding superfamily protein 0.03 OrthoFinder output from all 47 species
AT4G34410 RRTF1 redox responsive transcription factor 1 0.02 OrthoFinder output from all 47 species
AT5G11590 TINY2 Integrase-type DNA-binding superfamily protein 0.04 OrthoFinder output from all 47 species
AT5G13330 Rap2.6L related to AP2 6l 0.02 OrthoFinder output from all 47 species
AT5G21960 No alias Integrase-type DNA-binding superfamily protein 0.04 OrthoFinder output from all 47 species
Adi_g004344 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Adi_g116599 No alias subgroup ERF-III transcription factor & original... 0.03 OrthoFinder output from all 47 species
Als_g47315 RAP2.2 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aop_g62836 No alias not classified & original description: none 0.12 OrthoFinder output from all 47 species
Aspi01Gene07735.t1 DREB2A, DREB2,... subgroup ERF-IV/DREB2 transcription factor & original... 0.03 OrthoFinder output from all 47 species
Aspi01Gene63782.t1 ATERF12, ERF12,... subgroup ERF-VIII transcription factor & original... 0.04 OrthoFinder output from all 47 species
Azfi_s0119.g046680 No alias subgroup ERF-IX transcription factor & original... 0.04 OrthoFinder output from all 47 species
Azfi_s0398.g068193 No alias subgroup ERF-I transcription factor & original... 0.04 OrthoFinder output from all 47 species
Ceric.29G030500.1 AtERF48, DREB2C,... subgroup ERF-IV/DREB2 transcription factor & original... 0.04 OrthoFinder output from all 47 species
Ceric.33G045200.1 ATERF12, ERF12,... subgroup ERF-VIII transcription factor & original... 0.04 OrthoFinder output from all 47 species
Dac_g11691 DREB2A, DREB2 subgroup ERF-IV/DREB2 transcription factor & original... 0.04 OrthoFinder output from all 47 species
Dde_g02890 No alias subgroup ERF-IV/DREB2 transcription factor & original... 0.06 OrthoFinder output from all 47 species
Ehy_g28886 DEAR3 not classified & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01013923001 ERF104 RNA biosynthesis.transcriptional activation.AP2/ERF... 0.03 OrthoFinder output from all 47 species
GSVIVT01031388001 CBF4, DREB1D RNA biosynthesis.transcriptional activation.AP2/ERF... 0.04 OrthoFinder output from all 47 species
GSVIVT01032961001 LEP RNA biosynthesis.transcriptional activation.AP2/ERF... 0.03 OrthoFinder output from all 47 species
GSVIVT01035502001 No alias RNA biosynthesis.transcriptional activation.AP2/ERF... 0.03 OrthoFinder output from all 47 species
GSVIVT01036389001 No alias RNA biosynthesis.transcriptional activation.AP2/ERF... 0.04 OrthoFinder output from all 47 species
LOC_Os01g54890.1 ERF-1, ATERF-1,... transcription factor (ERF) 0.02 OrthoFinder output from all 47 species
LOC_Os01g66270.1 LOC_Os01g66270 transcription factor (DREB) 0.04 OrthoFinder output from all 47 species
LOC_Os02g52670.1 ERF110, LOC_Os02g52670 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
LOC_Os04g46410.1 ERF38, ATERF38,... transcription factor (DREB) 0.03 OrthoFinder output from all 47 species
LOC_Os04g46440.1 ERF38, ATERF38,... transcription factor (DREB) 0.03 OrthoFinder output from all 47 species
LOC_Os06g10780.1 LOC_Os06g10780 transcription factor (DREB) 0.03 OrthoFinder output from all 47 species
LOC_Os06g11940.1 LOC_Os06g11940 Ethylene-responsive transcription factor ERF017... 0.04 OrthoFinder output from all 47 species
LOC_Os06g40150.1 WIN1, SHN1,... transcription factor (ERF). SHN-type cutin and suberin... 0.02 OrthoFinder output from all 47 species
LOC_Os08g07700.1 LOC_Os08g07700 Ethylene-responsive transcription factor ERF087... 0.02 OrthoFinder output from all 47 species
LOC_Os08g35240.1 LOC_Os08g35240 Ethylene-responsive transcription factor ERF017... 0.06 OrthoFinder output from all 47 species
LOC_Os09g39810.1 LOC_Os09g39810 transcription factor (ERF) 0.02 OrthoFinder output from all 47 species
LOC_Os10g38000.1 HRD, LOC_Os10g38000 transcription factor (DREB) 0.02 OrthoFinder output from all 47 species
LOC_Os11g06770.2 ERF110, LOC_Os11g06770 transcription factor (ERF) 0.03 OrthoFinder output from all 47 species
LOC_Os11g13840.1 tny, LOC_Os11g13840 transcription factor (DREB) 0.03 OrthoFinder output from all 47 species
MA_10432800g0010 No alias transcription factor (ERF) 0.14 OrthoFinder output from all 47 species
MA_15000g0010 No alias Ethylene-responsive transcription factor ERF017... 0.03 OrthoFinder output from all 47 species
MA_166248g0020 ERF-1, ATERF-1 transcription factor (ERF) 0.05 OrthoFinder output from all 47 species
MA_214063g0010 No alias transcription factor (DREB) 0.02 OrthoFinder output from all 47 species
MA_30120g0010 DRN-LIKE, ESR2,... transcription factor (ERF) 0.02 OrthoFinder output from all 47 species
MA_99821g0010 TMO3, CRF2 transcription factor (ERF) 0.04 OrthoFinder output from all 47 species
Pir_g23466 ERF72, EBP, ATEBP, RAP2.3 transcription factor component *(HRE/RAP2.12) of... 0.08 OrthoFinder output from all 47 species
Pir_g24856 RAP2.11 transcription factor *(ERN1) & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g37613 TINY2 subgroup ERF-III transcription factor & original... 0.03 OrthoFinder output from all 47 species
Solyc01g005630.3.1 RAP2.11, Solyc01g005630 transcription factor (ERF). transcription factor (ERN1) 0.01 OrthoFinder output from all 47 species
Solyc01g057080.1.1 Solyc01g057080 transcription factor (DREB) 0.02 OrthoFinder output from all 47 species
Solyc01g090345.1.1 ATERF13, ERF13,... Ethylene-responsive transcription factor 13... 0.03 OrthoFinder output from all 47 species
Solyc03g005500.1.1 ERF14, ATERF14,... transcription factor (ERF). transcription factor (DREB) 0.02 OrthoFinder output from all 47 species
Solyc03g005520.1.1 ERF1, ATERF1,... transcription factor (ERF) 0.03 OrthoFinder output from all 47 species
Solyc03g026270.3.1 DREB1A, ATCBF3,... transcription factor (DREB). transcription factor (CBF/DREB1) 0.06 OrthoFinder output from all 47 species
Solyc03g026280.3.1 DREB1A, ATCBF3,... transcription factor (DREB). transcription factor (CBF/DREB1) 0.04 OrthoFinder output from all 47 species
Solyc03g124110.2.1 DREB1A, ATCBF3,... transcription factor (DREB). transcription factor (CBF/DREB1) 0.03 OrthoFinder output from all 47 species
Solyc06g035700.1.1 Solyc06g035700 transcription factor (DREB) 0.02 OrthoFinder output from all 47 species
Solyc06g082590.1.1 CRF4, Solyc06g082590 transcription factor (ERF) 0.03 OrthoFinder output from all 47 species
Solyc08g078190.2.1 ERF5, ATERF-5,... transcription factor (ERF) 0.02 OrthoFinder output from all 47 species
Solyc10g006130.1.1 ATERF3, ERF3,... transcription factor (ERF) 0.01 OrthoFinder output from all 47 species
Solyc10g009110.1.1 ATERF4, RAP2.5,... transcription factor (ERF) 0.02 OrthoFinder output from all 47 species
Solyc12g009240.1.1 Solyc12g009240 transcription factor (DREB) 0.04 OrthoFinder output from all 47 species
Zm00001e001139_P001 DREB26, Zm00001e001139 Ethylene-responsive transcription factor ERF014... 0.06 OrthoFinder output from all 47 species
Zm00001e002151_P001 HRD, Zm00001e002151 transcription factor (DREB) 0.06 OrthoFinder output from all 47 species
Zm00001e003579_P001 Zm00001e003579 Ethylene-responsive transcription factor ERF015... 0.01 OrthoFinder output from all 47 species
Zm00001e018522_P001 CBF4, DREB1D,... transcription factor (DREB) 0.02 OrthoFinder output from all 47 species
Zm00001e032434_P001 ERF-1, ATERF-1,... transcription factor (ERF) 0.03 OrthoFinder output from all 47 species
Zm00001e034661_P001 ERF110, Zm00001e034661 Ethylene-responsive transcription factor ERF115... 0.01 OrthoFinder output from all 47 species
Zm00001e036201_P001 Zm00001e036201 Ethylene-responsive transcription factor ERF014... 0.02 OrthoFinder output from all 47 species
Zm00001e036437_P001 ERF7, ATERF7,... transcription factor (ERF) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEA Interproscan
BP GO:0006355 regulation of DNA-templated transcription IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003677 DNA binding IEP HCCA
MF GO:0003743 translation initiation factor activity IEP HCCA
MF GO:0004066 asparagine synthase (glutamine-hydrolyzing) activity IEP HCCA
MF GO:0004842 ubiquitin-protein transferase activity IEP HCCA
BP GO:0006413 translational initiation IEP HCCA
BP GO:0006528 asparagine metabolic process IEP HCCA
BP GO:0006529 asparagine biosynthetic process IEP HCCA
MF GO:0008135 translation factor activity, RNA binding IEP HCCA
BP GO:0008152 metabolic process IEP HCCA
BP GO:0008652 amino acid biosynthetic process IEP HCCA
BP GO:0009066 aspartate family amino acid metabolic process IEP HCCA
BP GO:0009067 aspartate family amino acid biosynthetic process IEP HCCA
BP GO:0016053 organic acid biosynthetic process IEP HCCA
BP GO:0016567 protein ubiquitination IEP HCCA
MF GO:0016874 ligase activity IEP HCCA
MF GO:0016879 ligase activity, forming carbon-nitrogen bonds IEP HCCA
MF GO:0016884 carbon-nitrogen ligase activity, with glutamine as amido-N-donor IEP HCCA
MF GO:0019787 ubiquitin-like protein transferase activity IEP HCCA
BP GO:0032446 protein modification by small protein conjugation IEP HCCA
BP GO:0036211 protein modification process IEP HCCA
BP GO:0043412 macromolecule modification IEP HCCA
MF GO:0043565 sequence-specific DNA binding IEP HCCA
BP GO:0044238 primary metabolic process IEP HCCA
MF GO:0045182 translation regulator activity IEP HCCA
BP GO:0046394 carboxylic acid biosynthetic process IEP HCCA
BP GO:0070647 protein modification by small protein conjugation or removal IEP HCCA
BP GO:0071704 organic substance metabolic process IEP HCCA
MF GO:0090079 translation regulator activity, nucleic acid binding IEP HCCA
BP GO:1901605 alpha-amino acid metabolic process IEP HCCA
BP GO:1901607 alpha-amino acid biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR001471 AP2/ERF_dom 166 215
No external refs found!