Description : component *(uS17c) of small plastid ribosomal-subunit proteome & original description: none
Gene families : OG0002325 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002325_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | HRR: Aop_g43549 | |
Cluster | HCCA: Cluster_36 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
AMTR_s00003p00201470 | RPS17, CS17,... | Protein biosynthesis.organelle translation... | 0.04 | OrthoFinder output from all 47 species | |
AT1G79850 | RPS17, CS17, PRPS17 | ribosomal protein S17 | 0.1 | OrthoFinder output from all 47 species | |
Adi_g012725 | No alias | component *(uS17c) of small plastid ribosomal-subunit... | 0.07 | OrthoFinder output from all 47 species | |
Adi_g012726 | No alias | component *(uS17c) of small plastid ribosomal-subunit... | 0.04 | OrthoFinder output from all 47 species | |
Ala_g13255 | No alias | component *(uS17c) of small plastid ribosomal-subunit... | 0.07 | OrthoFinder output from all 47 species | |
Als_g47206 | RPS17, CS17, PRPS17 | component *(uS17c) of small plastid ribosomal-subunit... | 0.04 | OrthoFinder output from all 47 species | |
Aspi01Gene13972.t1 | RPS17, CS17,... | component *(uS17c) of small plastid ribosomal-subunit... | 0.05 | OrthoFinder output from all 47 species | |
Ceric.11G069100.1 | Ceric.11G069100 | component *(uS17c) of small plastid ribosomal-subunit... | 0.09 | OrthoFinder output from all 47 species | |
Cre02.g118950 | emb1129 | Protein biosynthesis.organelle translation... | 0.05 | OrthoFinder output from all 47 species | |
Dac_g17145 | RPS17, CS17, PRPS17 | component *(uS17c) of small plastid ribosomal-subunit... | 0.07 | OrthoFinder output from all 47 species | |
Dde_g25473 | RPS17, CS17, PRPS17 | component *(uS17c) of small plastid ribosomal-subunit... | 0.04 | OrthoFinder output from all 47 species | |
Gb_07769 | RPS17, CS17, PRPS17 | component psRPS17 of small ribosomal subunit proteome | 0.1 | OrthoFinder output from all 47 species | |
Msp_g12962 | No alias | component *(uS17c) of small plastid ribosomal-subunit... | 0.03 | OrthoFinder output from all 47 species | |
Nbi_g24135 | RPS17, CS17, PRPS17 | component *(uS17c) of small plastid ribosomal-subunit... | 0.04 | OrthoFinder output from all 47 species | |
Nbi_g38729 | RPS17, CS17, PRPS17 | component *(uS17c) of small plastid ribosomal-subunit... | 0.04 | OrthoFinder output from all 47 species | |
Ore_g06145 | No alias | component *(uS17c) of small plastid ribosomal-subunit... | 0.07 | OrthoFinder output from all 47 species | |
Pp3c11_14630V3.1 | RPS17, CS17,... | ribosomal protein S17 | 0.04 | OrthoFinder output from all 47 species | |
Pp3c1_12860V3.1 | RPS17, CS17,... | ribosomal protein S17 | 0.04 | OrthoFinder output from all 47 species | |
Sacu_v1.1_s0102.g019876 | RPS17, CS17, PRPS17 | component *(uS17c) of small plastid ribosomal-subunit... | 0.03 | OrthoFinder output from all 47 species | |
Solyc03g120630.4.1 | RPS17, CS17,... | component psRPS17 of small ribosomal subunit proteome | 0.07 | OrthoFinder output from all 47 species | |
Spa_g48114 | RPS17, CS17, PRPS17 | component *(uS17c) of small plastid ribosomal-subunit... | 0.06 | OrthoFinder output from all 47 species | |
Tin_g09281 | RPS17, CS17, PRPS17 | component *(uS17c) of small plastid ribosomal-subunit... | 0.12 | OrthoFinder output from all 47 species | |
Zm00001e028738_P001 | RPS17, CS17,... | component psRPS17 of small ribosomal subunit proteome | 0.03 | OrthoFinder output from all 47 species |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0003735 | structural constituent of ribosome | IEA | Interproscan |
CC | GO:0005840 | ribosome | IEA | Interproscan |
BP | GO:0006412 | translation | IEA | Interproscan |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0000166 | nucleotide binding | IEP | HCCA |
MF | GO:0005215 | transporter activity | IEP | HCCA |
BP | GO:0006605 | protein targeting | IEP | HCCA |
BP | GO:0006612 | protein targeting to membrane | IEP | HCCA |
BP | GO:0006613 | cotranslational protein targeting to membrane | IEP | HCCA |
BP | GO:0006614 | SRP-dependent cotranslational protein targeting to membrane | IEP | HCCA |
BP | GO:0006810 | transport | IEP | HCCA |
BP | GO:0006886 | intracellular protein transport | IEP | HCCA |
BP | GO:0010207 | photosystem II assembly | IEP | HCCA |
BP | GO:0015979 | photosynthesis | IEP | HCCA |
CC | GO:0016020 | membrane | IEP | HCCA |
MF | GO:0016747 | acyltransferase activity, transferring groups other than amino-acyl groups | IEP | HCCA |
MF | GO:0017076 | purine nucleotide binding | IEP | HCCA |
BP | GO:0022607 | cellular component assembly | IEP | HCCA |
MF | GO:0022857 | transmembrane transporter activity | IEP | HCCA |
MF | GO:0032553 | ribonucleotide binding | IEP | HCCA |
MF | GO:0032555 | purine ribonucleotide binding | IEP | HCCA |
BP | GO:0033365 | protein localization to organelle | IEP | HCCA |
MF | GO:0035639 | purine ribonucleoside triphosphate binding | IEP | HCCA |
MF | GO:0042626 | ATPase-coupled transmembrane transporter activity | IEP | HCCA |
MF | GO:0043168 | anion binding | IEP | HCCA |
BP | GO:0043933 | protein-containing complex organization | IEP | HCCA |
BP | GO:0045047 | protein targeting to ER | IEP | HCCA |
BP | GO:0051179 | localization | IEP | HCCA |
BP | GO:0051234 | establishment of localization | IEP | HCCA |
MF | GO:0051536 | iron-sulfur cluster binding | IEP | HCCA |
MF | GO:0051540 | metal cluster binding | IEP | HCCA |
BP | GO:0051668 | localization within membrane | IEP | HCCA |
BP | GO:0055085 | transmembrane transport | IEP | HCCA |
BP | GO:0065003 | protein-containing complex assembly | IEP | HCCA |
BP | GO:0070972 | protein localization to endoplasmic reticulum | IEP | HCCA |
BP | GO:0072594 | establishment of protein localization to organelle | IEP | HCCA |
BP | GO:0072599 | establishment of protein localization to endoplasmic reticulum | IEP | HCCA |
BP | GO:0072657 | protein localization to membrane | IEP | HCCA |
BP | GO:0090150 | establishment of protein localization to membrane | IEP | HCCA |
MF | GO:0097367 | carbohydrate derivative binding | IEP | HCCA |
MF | GO:0140359 | ABC-type transporter activity | IEP | HCCA |
MF | GO:1901265 | nucleoside phosphate binding | IEP | HCCA |
InterPro domains | Description | Start | Stop |
---|---|---|---|
IPR000266 | Ribosomal_S17/S11 | 91 | 158 |
No external refs found! |