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  5. Aop_g39112

Aop_g39112 (ATRPA70A, RPA1A,...)


Aliases : ATRPA70A, RPA1A, ATRPA1A, RPA70A

Description : component *(RPA1) of RPA presynaptic filament assembly factor complex & original description: none


Gene families : OG0002229 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002229_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Aop_g39112

Target Alias Description ECC score Gene Family Method Actions
Ehy_g30947 ATRPA70A, RPA1A,... component *(RPA1) of RPA presynaptic filament assembly... 0.04 OrthoFinder output from all 47 species
Msp_g19364 ATRPA70A, RPA1A,... component *(RPA1) of RPA presynaptic filament assembly... 0.04 OrthoFinder output from all 47 species
Smo441216 ATRPA70A, RPA1A,... Cell cycle.mitosis and meiosis.meiotic recombination.DNA... 0.02 OrthoFinder output from all 47 species
Tin_g09994 ATRPA70A, RPA1A,... component *(RPA1) of RPA presynaptic filament assembly... 0.05 OrthoFinder output from all 47 species
Zm00001e023770_P001 ATRPA70A, RPA1A,... component RPA1 of single-stranded-DNA binding RPA... 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEA Interproscan
MF GO:0008270 zinc ion binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEP HCCA
MF GO:0003950 NAD+ ADP-ribosyltransferase activity IEP HCCA
BP GO:0008150 biological_process IEP HCCA
MF GO:0016740 transferase activity IEP HCCA
MF GO:0016757 glycosyltransferase activity IEP HCCA
MF GO:0016763 pentosyltransferase activity IEP HCCA
BP GO:0019538 protein metabolic process IEP HCCA
BP GO:0043170 macromolecule metabolic process IEP HCCA
MF GO:0043565 sequence-specific DNA binding IEP HCCA
MF GO:0140110 transcription regulator activity IEP HCCA
BP GO:1901564 organonitrogen compound metabolic process IEP HCCA
InterPro domains Description Start Stop
IPR004365 NA-bd_OB_tRNA 215 299
IPR007199 Rep_factor-A_N 7 101
IPR031657 REPA_OB_2 324 428
IPR013955 Rep_factor-A_C 486 635
IPR001878 Znf_CCHC 714 730
No external refs found!