Description : component *(eL36) of large ribosomal-subunit (LSU) proteome & original description: none
Gene families : OG0000800 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000800_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | HRR: Aop_g34431 | |
Cluster | HCCA: Cluster_107 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
Adi_g070473 | No alias | component *(eL36) of large ribosomal-subunit (LSU)... | 0.03 | OrthoFinder output from all 47 species | |
Aob_g24631 | No alias | component *(eL36) of large ribosomal-subunit (LSU)... | 0.03 | OrthoFinder output from all 47 species | |
Lfl_g31738 | No alias | component *(eL36) of large ribosomal-subunit (LSU)... | 0.02 | OrthoFinder output from all 47 species | |
Pp3c1_32310V3.1 | Pp3c1_32310 | Ribosomal protein L36e family protein | 0.01 | OrthoFinder output from all 47 species | |
Ppi_g38235 | No alias | component *(eL36) of large ribosomal-subunit (LSU)... | 0.03 | OrthoFinder output from all 47 species |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0003735 | structural constituent of ribosome | IEA | Interproscan |
CC | GO:0005840 | ribosome | IEA | Interproscan |
BP | GO:0006412 | translation | IEA | Interproscan |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
BP | GO:0000375 | RNA splicing, via transesterification reactions | IEP | HCCA |
BP | GO:0000377 | RNA splicing, via transesterification reactions with bulged adenosine as nucleophile | IEP | HCCA |
BP | GO:0000398 | mRNA splicing, via spliceosome | IEP | HCCA |
BP | GO:0006397 | mRNA processing | IEP | HCCA |
BP | GO:0008380 | RNA splicing | IEP | HCCA |
BP | GO:0016071 | mRNA metabolic process | IEP | HCCA |
CC | GO:0030532 | small nuclear ribonucleoprotein complex | IEP | HCCA |
CC | GO:0042597 | periplasmic space | IEP | HCCA |
CC | GO:0046540 | U4/U6 x U5 tri-snRNP complex | IEP | HCCA |
CC | GO:0097525 | spliceosomal snRNP complex | IEP | HCCA |
CC | GO:0097526 | spliceosomal tri-snRNP complex | IEP | HCCA |
CC | GO:0120114 | Sm-like protein family complex | IEP | HCCA |
CC | GO:1990904 | ribonucleoprotein complex | IEP | HCCA |
InterPro domains | Description | Start | Stop |
---|---|---|---|
IPR000509 | Ribosomal_L36e | 3 | 98 |
No external refs found! |