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  5. Aop_g33012

Aop_g33012 (AL1)


Aliases : AL1

Description : methylation reader Alfin of PRC1 complex & original description: none


Gene families : OG0000258 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000258_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Aop_g33012

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00099p00155940 AL5,... RNA biosynthesis.transcriptional activation.Alfin-like... 0.03 OrthoFinder output from all 47 species
AT1G14510 AL7 alfin-like 7 0.02 OrthoFinder output from all 47 species
Adi_g050291 AL7 methylation reader Alfin of PRC1 complex & original... 0.03 OrthoFinder output from all 47 species
Dac_g30272 AL2 methylation reader Alfin of PRC1 complex & original... 0.03 OrthoFinder output from all 47 species
LOC_Os05g34640.1 AL4, LOC_Os05g34640 Alfin-like transcription factor 0.03 OrthoFinder output from all 47 species
Sam_g06900 No alias methylation reader Alfin of PRC1 complex & original... 0.02 OrthoFinder output from all 47 species
Zm00001e039778_P003 AL7, Zm00001e039778 Alfin-like transcription factor 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
BP GO:0006355 regulation of DNA-templated transcription IEA Interproscan
MF GO:0042393 histone binding IEA Interproscan
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Type GO Term Name Evidence Source
CC GO:0000148 1,3-beta-D-glucan synthase complex IEP HCCA
CC GO:0000151 ubiquitin ligase complex IEP HCCA
CC GO:0000152 nuclear ubiquitin ligase complex IEP HCCA
BP GO:0000271 polysaccharide biosynthetic process IEP HCCA
MF GO:0003682 chromatin binding IEP HCCA
MF GO:0003843 1,3-beta-D-glucan synthase activity IEP HCCA
MF GO:0003909 DNA ligase activity IEP HCCA
MF GO:0003910 DNA ligase (ATP) activity IEP HCCA
MF GO:0004175 endopeptidase activity IEP HCCA
MF GO:0004190 aspartic-type endopeptidase activity IEP HCCA
CC GO:0005680 anaphase-promoting complex IEP HCCA
BP GO:0005976 polysaccharide metabolic process IEP HCCA
BP GO:0006073 cellular glucan metabolic process IEP HCCA
BP GO:0006074 (1->3)-beta-D-glucan metabolic process IEP HCCA
BP GO:0006075 (1->3)-beta-D-glucan biosynthetic process IEP HCCA
BP GO:0006281 DNA repair IEP HCCA
BP GO:0006310 DNA recombination IEP HCCA
BP GO:0006810 transport IEP HCCA
BP GO:0006886 intracellular protein transport IEP HCCA
BP GO:0006974 cellular response to DNA damage stimulus IEP HCCA
BP GO:0007346 regulation of mitotic cell cycle IEP HCCA
BP GO:0008104 protein localization IEP HCCA
BP GO:0009250 glucan biosynthetic process IEP HCCA
BP GO:0010564 regulation of cell cycle process IEP HCCA
BP GO:0015031 protein transport IEP HCCA
BP GO:0016051 carbohydrate biosynthetic process IEP HCCA
MF GO:0016886 ligase activity, forming phosphoric ester bonds IEP HCCA
MF GO:0019899 enzyme binding IEP HCCA
BP GO:0030071 regulation of mitotic metaphase/anaphase transition IEP HCCA
CC GO:0030117 membrane coat IEP HCCA
MF GO:0031267 small GTPase binding IEP HCCA
CC GO:0031461 cullin-RING ubiquitin ligase complex IEP HCCA
CC GO:0032991 protein-containing complex IEP HCCA
BP GO:0033036 macromolecule localization IEP HCCA
BP GO:0033043 regulation of organelle organization IEP HCCA
BP GO:0033044 regulation of chromosome organization IEP HCCA
BP GO:0033045 regulation of sister chromatid segregation IEP HCCA
BP GO:0033554 cellular response to stress IEP HCCA
BP GO:0033692 cellular polysaccharide biosynthetic process IEP HCCA
BP GO:0034637 cellular carbohydrate biosynthetic process IEP HCCA
MF GO:0035251 UDP-glucosyltransferase activity IEP HCCA
BP GO:0044042 glucan metabolic process IEP HCCA
BP GO:0044264 cellular polysaccharide metabolic process IEP HCCA
BP GO:0045184 establishment of protein localization IEP HCCA
MF GO:0046527 glucosyltransferase activity IEP HCCA
BP GO:0046907 intracellular transport IEP HCCA
MF GO:0051020 GTPase binding IEP HCCA
BP GO:0051128 regulation of cellular component organization IEP HCCA
BP GO:0051179 localization IEP HCCA
BP GO:0051234 establishment of localization IEP HCCA
BP GO:0051273 beta-glucan metabolic process IEP HCCA
BP GO:0051274 beta-glucan biosynthetic process IEP HCCA
BP GO:0051641 cellular localization IEP HCCA
BP GO:0051649 establishment of localization in cell IEP HCCA
BP GO:0051716 cellular response to stimulus IEP HCCA
BP GO:0051726 regulation of cell cycle IEP HCCA
BP GO:0051983 regulation of chromosome segregation IEP HCCA
MF GO:0070001 aspartic-type peptidase activity IEP HCCA
BP GO:0070727 cellular macromolecule localization IEP HCCA
BP GO:0071702 organic substance transport IEP HCCA
BP GO:0071705 nitrogen compound transport IEP HCCA
CC GO:0098796 membrane protein complex IEP HCCA
CC GO:0098797 plasma membrane protein complex IEP HCCA
MF GO:0140097 catalytic activity, acting on DNA IEP HCCA
CC GO:0140535 intracellular protein-containing complex IEP HCCA
BP GO:1901987 regulation of cell cycle phase transition IEP HCCA
BP GO:1901990 regulation of mitotic cell cycle phase transition IEP HCCA
BP GO:1902099 regulation of metaphase/anaphase transition of cell cycle IEP HCCA
CC GO:1902494 catalytic complex IEP HCCA
CC GO:1990234 transferase complex IEP HCCA
InterPro domains Description Start Stop
IPR019787 Znf_PHD-finger 259 307
IPR021998 Alfin_N 79 204
No external refs found!