Aliases : ATU2AF65A
Description : large subunit of U2AF pre-RNA splicing auxiliary factor complex & original description: none
Gene families : OG0000716 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000716_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
AMTR_s00009p00267190 | ATU2AF65A,... | RNA processing.RNA splicing.U2-type-intron-specific... | 0.03 | OrthoFinder output from all 47 species | |
Adi_g022172 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Adi_g117015 | ATU2AF65A | large subunit of U2AF pre-RNA splicing auxiliary factor... | 0.03 | OrthoFinder output from all 47 species | |
Als_g10024 | ATU2AF65A | large subunit of U2AF pre-RNA splicing auxiliary factor... | 0.02 | OrthoFinder output from all 47 species | |
Als_g38682 | ATU2AF65A | large subunit of U2AF pre-RNA splicing auxiliary factor... | 0.05 | OrthoFinder output from all 47 species | |
Cba_g12276 | ATU2AF65A | large subunit of U2AF pre-RNA splicing auxiliary factor... | 0.04 | OrthoFinder output from all 47 species | |
Ceric.02G010500.1 | ATU2AF65A,... | large subunit of U2AF pre-RNA splicing auxiliary factor... | 0.04 | OrthoFinder output from all 47 species | |
Ceric.30G061500.1 | Ceric.30G061500 | large subunit of U2AF pre-RNA splicing auxiliary factor... | 0.02 | OrthoFinder output from all 47 species | |
Cre09.g391949 | No alias | RNA processing.RNA splicing.U2-type-intron-specific... | 0.01 | OrthoFinder output from all 47 species | |
Dcu_g07575 | ATU2AF65A | large subunit of U2AF pre-RNA splicing auxiliary factor... | 0.03 | OrthoFinder output from all 47 species | |
Dcu_g13843 | No alias | large subunit of U2AF pre-RNA splicing auxiliary factor... | 0.03 | OrthoFinder output from all 47 species | |
Dde_g02848 | No alias | large subunit of U2AF pre-RNA splicing auxiliary factor... | 0.03 | OrthoFinder output from all 47 species | |
Dde_g11336 | No alias | large subunit of U2AF pre-RNA splicing auxiliary factor... | 0.03 | OrthoFinder output from all 47 species | |
Lfl_g04836 | ATU2AF65A | large subunit of U2AF pre-RNA splicing auxiliary factor... | 0.03 | OrthoFinder output from all 47 species | |
Lfl_g19287 | ATU2AF65A | large subunit of U2AF pre-RNA splicing auxiliary factor... | 0.04 | OrthoFinder output from all 47 species | |
MA_10429502g0010 | ATU2AF65A | large subunit of U2AF pre-RNA splicing auxiliary factor complex | 0.03 | OrthoFinder output from all 47 species | |
Nbi_g35208 | No alias | large subunit of U2AF pre-RNA splicing auxiliary factor... | 0.02 | OrthoFinder output from all 47 species | |
Pir_g61224 | No alias | large subunit of U2AF pre-RNA splicing auxiliary factor... | 0.03 | OrthoFinder output from all 47 species | |
Pnu_g32452 | ATU2AF65A | large subunit of U2AF pre-RNA splicing auxiliary factor... | 0.03 | OrthoFinder output from all 47 species | |
Pnu_g32453 | ATU2AF65A | large subunit of U2AF pre-RNA splicing auxiliary factor... | 0.04 | OrthoFinder output from all 47 species | |
Sam_g26330 | No alias | large subunit of U2AF pre-RNA splicing auxiliary factor... | 0.03 | OrthoFinder output from all 47 species | |
Solyc02g062920.3.1 | ATU2AF65A, Solyc02g062920 | large subunit of U2AF pre-RNA splicing auxiliary factor complex | 0.03 | OrthoFinder output from all 47 species | |
Solyc12g008750.3.1 | Solyc12g008750 | large subunit of U2AF pre-RNA splicing auxiliary factor complex | 0.03 | OrthoFinder output from all 47 species | |
Spa_g04427 | No alias | large subunit of U2AF pre-RNA splicing auxiliary factor... | 0.02 | OrthoFinder output from all 47 species | |
Spa_g18763 | No alias | large subunit of U2AF pre-RNA splicing auxiliary factor... | 0.04 | OrthoFinder output from all 47 species | |
Zm00001e021000_P006 | Zm00001e021000 | large subunit of U2AF pre-RNA splicing auxiliary factor complex | 0.02 | OrthoFinder output from all 47 species |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0003723 | RNA binding | IEA | Interproscan |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0003712 | transcription coregulator activity | IEP | HCCA |
MF | GO:0004518 | nuclease activity | IEP | HCCA |
MF | GO:0004540 | ribonuclease activity | IEP | HCCA |
BP | GO:0006281 | DNA repair | IEP | HCCA |
BP | GO:0006325 | chromatin organization | IEP | HCCA |
BP | GO:0006334 | nucleosome assembly | IEP | HCCA |
BP | GO:0006338 | chromatin remodeling | IEP | HCCA |
BP | GO:0006355 | regulation of DNA-templated transcription | IEP | HCCA |
BP | GO:0006357 | regulation of transcription by RNA polymerase II | IEP | HCCA |
BP | GO:0006974 | cellular response to DNA damage stimulus | IEP | HCCA |
BP | GO:0009889 | regulation of biosynthetic process | IEP | HCCA |
BP | GO:0010468 | regulation of gene expression | IEP | HCCA |
BP | GO:0010556 | regulation of macromolecule biosynthetic process | IEP | HCCA |
CC | GO:0016592 | mediator complex | IEP | HCCA |
MF | GO:0016765 | transferase activity, transferring alkyl or aryl (other than methyl) groups | IEP | HCCA |
BP | GO:0019219 | regulation of nucleobase-containing compound metabolic process | IEP | HCCA |
BP | GO:0019222 | regulation of metabolic process | IEP | HCCA |
MF | GO:0019899 | enzyme binding | IEP | HCCA |
MF | GO:0031267 | small GTPase binding | IEP | HCCA |
BP | GO:0031323 | regulation of cellular metabolic process | IEP | HCCA |
BP | GO:0031326 | regulation of cellular biosynthetic process | IEP | HCCA |
BP | GO:0033554 | cellular response to stress | IEP | HCCA |
BP | GO:0034728 | nucleosome organization | IEP | HCCA |
BP | GO:0043933 | protein-containing complex organization | IEP | HCCA |
MF | GO:0051020 | GTPase binding | IEP | HCCA |
BP | GO:0051171 | regulation of nitrogen compound metabolic process | IEP | HCCA |
BP | GO:0051252 | regulation of RNA metabolic process | IEP | HCCA |
BP | GO:0051716 | cellular response to stimulus | IEP | HCCA |
BP | GO:0060255 | regulation of macromolecule metabolic process | IEP | HCCA |
BP | GO:0065003 | protein-containing complex assembly | IEP | HCCA |
BP | GO:0065004 | protein-DNA complex assembly | IEP | HCCA |
BP | GO:0071824 | protein-DNA complex subunit organization | IEP | HCCA |
BP | GO:0080090 | regulation of primary metabolic process | IEP | HCCA |
BP | GO:1903506 | regulation of nucleic acid-templated transcription | IEP | HCCA |
BP | GO:2001141 | regulation of RNA biosynthetic process | IEP | HCCA |
No external refs found! |