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  5. Aop_g29915

Aop_g29915 (PGP1, ABCB1, ATPGP1)


Aliases : PGP1, ABCB1, ATPGP1

Description : subfamily ABCB transporter & original description: none


Gene families : OG0000048 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Aop_g29915

Target Alias Description ECC score Gene Family Method Actions
AT4G01830 PGP5 P-glycoprotein 5 0.03 OrthoFinder output from all 47 species
AT4G25960 PGP2 P-glycoprotein 2 0.02 OrthoFinder output from all 47 species
Adi_g025752 ABCB19,... not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g029160 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g056640 ABCB19,... subfamily ABCB transporter & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g056650 ABCB19,... not classified & original description: none 0.04 OrthoFinder output from all 47 species
Adi_g058585 ABCB19,... subfamily ABCB transporter & original description: none 0.04 OrthoFinder output from all 47 species
Adi_g067518 PGP1, ABCB1, ATPGP1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g112185 ABCB19,... not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g25151 PGP2 subfamily ABCB transporter & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g26174 No alias subfamily ABCB transporter & original description: none 0.02 OrthoFinder output from all 47 species
Als_g07131 ABCB19,... not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g12898 PGP2 subfamily ABCB transporter & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g19030 ABCB19,... subfamily ABCB transporter & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g22201 ABCB19,... subfamily ABCB transporter & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene05873.t1 ABCB19,... subfamily ABCB transporter & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene32170.t1 ABCB14,... subfamily ABCB transporter & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene42787.t1 ATPGP4, PGP4,... subfamily ABCB transporter & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.10G031400.1 PGP13, Ceric.10G031400 subfamily ABCB transporter & original description:... 0.03 OrthoFinder output from all 47 species
Ceric.18G013800.1 Ceric.18G013800 subfamily ABCB transporter & original description:... 0.04 OrthoFinder output from all 47 species
Ceric.1Z238200.1 Ceric.1Z238200 subfamily ABCB transporter & original description:... 0.02 OrthoFinder output from all 47 species
Ceric.36G048300.1 Ceric.36G048300 subfamily ABCB transporter & original description:... 0.02 OrthoFinder output from all 47 species
Ceric.38G058800.1 PGP2, Ceric.38G058800 subfamily ABCB transporter & original description:... 0.03 OrthoFinder output from all 47 species
Ehy_g13758 ABCB19,... subfamily ABCB transporter & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g27838 PGP11 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Gb_02469 No alias subfamily ABCB transporter 0.03 OrthoFinder output from all 47 species
Gb_07563 ABCB19,... subfamily ABCB transporter 0.03 OrthoFinder output from all 47 species
Gb_32125 PGP11 subfamily ABCB transporter 0.03 OrthoFinder output from all 47 species
Gb_33057 ABCB19,... subfamily ABCB transporter 0.03 OrthoFinder output from all 47 species
LOC_Os01g50070.1 LOC_Os01g50070 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
LOC_Os01g50080.1 ATPGP4, PGP4,... subfamily ABCB transporter 0.03 OrthoFinder output from all 47 species
LOC_Os01g50160.1 PGP11, LOC_Os01g50160 subfamily ABCB transporter 0.02 OrthoFinder output from all 47 species
LOC_Os01g52550.1 LOC_Os01g52550 subfamily ABCB transporter 0.02 OrthoFinder output from all 47 species
LOC_Os02g09720.1 LOC_Os02g09720 subfamily ABCB transporter 0.02 OrthoFinder output from all 47 species
LOC_Os02g46680.1 PGP2, LOC_Os02g46680 subfamily ABCB transporter 0.04 OrthoFinder output from all 47 species
LOC_Os03g17180.1 PGP20, LOC_Os03g17180 subfamily ABCB transporter 0.02 OrthoFinder output from all 47 species
Len_g56555 PGP11 subfamily ABCB transporter & original description: none 0.02 OrthoFinder output from all 47 species
MA_102299g0010 No alias Putative multidrug resistance protein OS=Oryza sativa... 0.02 OrthoFinder output from all 47 species
MA_10431815g0020 ABCB19,... auxin efflux transporter (ABCB19). subfamily ABCB transporter 0.02 OrthoFinder output from all 47 species
MA_107576g0010 No alias subfamily ABCB transporter 0.02 OrthoFinder output from all 47 species
MA_111099g0010 No alias subfamily ABCB transporter 0.04 OrthoFinder output from all 47 species
MA_636449g0010 No alias subfamily ABCB transporter 0.02 OrthoFinder output from all 47 species
MA_83806g0010 No alias subfamily ABCB transporter 0.03 OrthoFinder output from all 47 species
Mp2g11920.1 ABCB19,... subfamily ABCB transporter 0.03 OrthoFinder output from all 47 species
Mp7g04390.1 ATPGP4, PGP4, ABCB4, MDR4 subfamily ABCB transporter 0.02 OrthoFinder output from all 47 species
Nbi_g02494 PGP2 subfamily ABCB transporter & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g37290 PGP11 subfamily ABCB transporter & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g41769 No alias subfamily ABCB transporter & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g33236 ABCB19,... ABC-B-type transporter *(AMN3) & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g60074 PGP11 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g60650 PGP21 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g01345 ABCB19,... subfamily ABCB transporter & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g60298 PGP2 subfamily ABCB transporter & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g48720 No alias subfamily ABCB transporter & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g49529 No alias subfamily ABCB transporter & original description: none 0.04 OrthoFinder output from all 47 species
Smo231714 No alias Solute transport.primary active transport.ABC... 0.02 OrthoFinder output from all 47 species
Smo92485 ABCB19,... Solute transport.primary active transport.ABC... 0.04 OrthoFinder output from all 47 species
Solyc03g093650.3.1 Solyc03g093650 subfamily ABCB transporter 0.03 OrthoFinder output from all 47 species
Solyc06g009280.1.1 PGP11, Solyc06g009280 subfamily ABCB transporter 0.03 OrthoFinder output from all 47 species
Solyc06g009290.4.1 PGP21, Solyc06g009290 subfamily ABCB transporter 0.04 OrthoFinder output from all 47 species
Solyc08g076720.4.1 PGP2, Solyc08g076720 subfamily ABCB transporter 0.02 OrthoFinder output from all 47 species
Solyc11g067300.2.1 PGP11, Solyc11g067300 subfamily ABCB transporter 0.03 OrthoFinder output from all 47 species
Tin_g06699 PGP2 subfamily ABCB transporter & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g08541 ABCB19,... subfamily ABCB transporter & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e003866_P001 PGP1, ABCB1,... subfamily ABCB transporter 0.03 OrthoFinder output from all 47 species
Zm00001e017444_P002 PGP21, Zm00001e017444 subfamily ABCB transporter 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEP HCCA
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP HCCA
MF GO:0004559 alpha-mannosidase activity IEP HCCA
BP GO:0005996 monosaccharide metabolic process IEP HCCA
BP GO:0006013 mannose metabolic process IEP HCCA
MF GO:0015923 mannosidase activity IEP HCCA
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP HCCA
BP GO:0019318 hexose metabolic process IEP HCCA
MF GO:0140110 transcription regulator activity IEP HCCA
InterPro domains Description Start Stop
IPR011527 ABC1_TM_dom 4 152
IPR011527 ABC1_TM_dom 537 809
IPR003439 ABC_transporter-like_ATP-bd 222 371
IPR003439 ABC_transporter-like_ATP-bd 877 1026
No external refs found!