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  5. Aop_g29244

Aop_g29244


Description : not classified & original description: none


Gene families : OG0002247 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002247_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Aop_g29244
Cluster HCCA: Cluster_329

Target Alias Description ECC score Gene Family Method Actions
Aob_g33206 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g07799 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dac_g17120 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ehy_g13893 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01022139001 No alias No description available 0.02 OrthoFinder output from all 47 species
Nbi_g02514 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ore_g18806 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g41533 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g04364 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g07195 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g25990 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g17784 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g10051 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0002097 tRNA wobble base modification IEP HCCA
BP GO:0002098 tRNA wobble uridine modification IEP HCCA
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003899 DNA-directed 5'-3' RNA polymerase activity IEP HCCA
MF GO:0005488 binding IEP HCCA
BP GO:0006139 nucleobase-containing compound metabolic process IEP HCCA
BP GO:0006351 DNA-templated transcription IEP HCCA
BP GO:0006396 RNA processing IEP HCCA
BP GO:0006397 mRNA processing IEP HCCA
BP GO:0006399 tRNA metabolic process IEP HCCA
BP GO:0006400 tRNA modification IEP HCCA
BP GO:0006725 cellular aromatic compound metabolic process IEP HCCA
BP GO:0008033 tRNA processing IEP HCCA
MF GO:0009055 electron transfer activity IEP HCCA
BP GO:0009451 RNA modification IEP HCCA
BP GO:0016070 RNA metabolic process IEP HCCA
BP GO:0016071 mRNA metabolic process IEP HCCA
MF GO:0016779 nucleotidyltransferase activity IEP HCCA
BP GO:0032774 RNA biosynthetic process IEP HCCA
CC GO:0033588 elongator holoenzyme complex IEP HCCA
MF GO:0034062 5'-3' RNA polymerase activity IEP HCCA
BP GO:0034470 ncRNA processing IEP HCCA
BP GO:0034641 cellular nitrogen compound metabolic process IEP HCCA
BP GO:0034660 ncRNA metabolic process IEP HCCA
BP GO:0046483 heterocycle metabolic process IEP HCCA
BP GO:0090304 nucleic acid metabolic process IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
BP GO:0097659 nucleic acid-templated transcription IEP HCCA
MF GO:0097747 RNA polymerase activity IEP HCCA
MF GO:0140098 catalytic activity, acting on RNA IEP HCCA
CC GO:0140535 intracellular protein-containing complex IEP HCCA
BP GO:1901360 organic cyclic compound metabolic process IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA

No InterPro domains available for this sequence

No external refs found!