Aop_g27355 (PBC1)

Aliases : PBC1

Description : beta-type-3 component *(PBC) of 26S proteasome & original description: none

Gene families : OG0004036 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004036_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Aop_g27355

Target	Alias	Description	ECC score	Gene Family Method
Azfi_s0008.g011490	PBC1	beta-type-3 component *(PBC) of 26S proteasome &...	0.02	OrthoFinder output from all 47 species
Cre06.g267500	PBC1	Protein degradation.26S proteasome.20S core...	0.02	OrthoFinder output from all 47 species
Gb_09326	PBC1	component beta type-3 of 26S proteasome	0.03	OrthoFinder output from all 47 species
Gb_29749	PBC1	component beta type-3 of 26S proteasome	0.04	OrthoFinder output from all 47 species
Pir_g06584	PBC1	beta-type-3 component *(PBC) of 26S proteasome &...	0.02	OrthoFinder output from all 47 species
Pir_g53673	PBC1	beta-type-3 component *(PBC) of 26S proteasome &...	0.03	OrthoFinder output from all 47 species
Ppi_g06188	PBC1	beta-type-3 component *(PBC) of 26S proteasome &...	0.03	OrthoFinder output from all 47 species
Solyc04g009410.3.1	PBC1, Solyc04g009410	component beta type-3 of 26S proteasome	0.04	OrthoFinder output from all 47 species
Spa_g43832	PBC2	beta-type-3 component *(PBC) of 26S proteasome &...	0.03	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005839	proteasome core complex	IEA	Interproscan
BP	GO:0006508	proteolysis	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0019538	protein metabolic process	None	Extended
CC	GO:0032991	protein-containing complex	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0051603	proteolysis involved in protein catabolic process	IEA	Interproscan
BP	GO:0071704	organic substance metabolic process	None	Extended
CC	GO:0140535	intracellular protein-containing complex	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended
CC	GO:1902494	catalytic complex	None	Extended

Type	GO Term	Name	Evidence	Source
MF	GO:0004807	triose-phosphate isomerase activity	IEP	HCCA
MF	GO:0016829	lyase activity	IEP	HCCA
MF	GO:0016830	carbon-carbon lyase activity	IEP	HCCA
MF	GO:0016832	aldehyde-lyase activity	IEP	HCCA
MF	GO:0016853	isomerase activity	IEP	HCCA
MF	GO:0016860	intramolecular oxidoreductase activity	IEP	HCCA
MF	GO:0016861	intramolecular oxidoreductase activity, interconverting aldoses and ketoses	IEP	HCCA
MF	GO:0019842	vitamin binding	IEP	HCCA
MF	GO:0030170	pyridoxal phosphate binding	IEP	HCCA
MF	GO:0043169	cation binding	IEP	HCCA
MF	GO:0046872	metal ion binding	IEP	HCCA
MF	GO:0070279	vitamin B6 binding	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR001353	Proteasome_sua/b	7	191

External Links

No external refs found!