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  5. Lfl_g11286

Lfl_g11286 (APUM12, PUM12)


Aliases : APUM12, PUM12

Description : not classified & original description: none


Gene families : OG0000858 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000858_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Lfl_g11286

Target Alias Description ECC score Gene Family Method Actions
Aspi01Gene37289.t1 APUM12, PUM12,... not classified & original description: none 0.03 OrthoFinder output from all 47 species
MA_10427999g0010 APUM12, PUM12 Pumilio homolog 12 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0004175 endopeptidase activity IEP HCCA
MF GO:0004222 metalloendopeptidase activity IEP HCCA
MF GO:0004379 glycylpeptide N-tetradecanoyltransferase activity IEP HCCA
BP GO:0006325 chromatin organization IEP HCCA
BP GO:0006644 phospholipid metabolic process IEP HCCA
MF GO:0008237 metallopeptidase activity IEP HCCA
BP GO:0008610 lipid biosynthetic process IEP HCCA
BP GO:0008654 phospholipid biosynthetic process IEP HCCA
MF GO:0016410 N-acyltransferase activity IEP HCCA
MF GO:0016740 transferase activity IEP HCCA
MF GO:0016746 acyltransferase activity IEP HCCA
MF GO:0016747 acyltransferase activity, transferring groups other than amino-acyl groups IEP HCCA
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP HCCA
MF GO:0016780 phosphotransferase activity, for other substituted phosphate groups IEP HCCA
MF GO:0019107 myristoyltransferase activity IEP HCCA
BP GO:0044255 cellular lipid metabolic process IEP HCCA
BP GO:0090407 organophosphate biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR000571 Znf_CCCH 305 324
IPR001313 Pumilio_RNA-bd_rpt 431 464
IPR001313 Pumilio_RNA-bd_rpt 467 500
IPR001313 Pumilio_RNA-bd_rpt 653 684
IPR001313 Pumilio_RNA-bd_rpt 690 706
IPR001313 Pumilio_RNA-bd_rpt 578 611
IPR001313 Pumilio_RNA-bd_rpt 543 573
IPR001313 Pumilio_RNA-bd_rpt 616 634
IPR001313 Pumilio_RNA-bd_rpt 508 538
No external refs found!