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Description : assembly factor involved in RuBisCo assembly *(BSD2) & original description: none
Gene families : OG0007502 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0007502_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: Aop_g26060 | |
| Cluster | HCCA: Cluster_36 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AMTR_s00078p00065110 | evm_27.TU.AmTr_v1... | Photosynthesis.calvin cycle.ribulose-1,5-bisphosphat... | 0.02 | OrthoFinder output from all 47 species | |
| AT3G47650 | No alias | DnaJ/Hsp40 cysteine-rich domain superfamily protein | 0.04 | OrthoFinder output from all 47 species | |
| Aev_g06316 | No alias | assembly factor involved in RuBisCo assembly *(BSD2) &... | 0.05 | OrthoFinder output from all 47 species | |
| Ala_g06623 | No alias | assembly factor involved in RuBisCo assembly *(BSD2) &... | 0.12 | OrthoFinder output from all 47 species | |
| Als_g00356 | No alias | assembly factor involved in RuBisCo assembly *(BSD2) &... | 0.08 | OrthoFinder output from all 47 species | |
| Azfi_s0168.g054582 | No alias | assembly factor involved in RuBisCo assembly *(BSD2) &... | 0.07 | OrthoFinder output from all 47 species | |
| Cba_g54988 | No alias | assembly factor involved in RuBisCo assembly *(BSD2) &... | 0.04 | OrthoFinder output from all 47 species | |
| Dac_g38788 | No alias | assembly factor involved in RuBisCo assembly *(BSD2) &... | 0.04 | OrthoFinder output from all 47 species | |
| Dcu_g03433 | No alias | assembly factor involved in RuBisCo assembly *(BSD2) &... | 0.06 | OrthoFinder output from all 47 species | |
| Dde_g14872 | No alias | assembly factor involved in RuBisCo assembly *(BSD2) &... | 0.09 | OrthoFinder output from all 47 species | |
| GSVIVT01015532001 | No alias | Photosynthesis.calvin cycle.ribulose-1,5-bisphosphat... | 0.02 | OrthoFinder output from all 47 species | |
| GSVIVT01015534001 | No alias | Photosynthesis.calvin cycle.ribulose-1,5-bisphosphat... | 0.02 | OrthoFinder output from all 47 species | |
| GSVIVT01035845001 | No alias | Photosynthesis.calvin cycle.ribulose-1,5-bisphosphat... | 0.03 | OrthoFinder output from all 47 species | |
| LOC_Os06g22690.1 | LOC_Os06g22690 | BSD2 assembly factor involved in RuBisCo assembly | 0.07 | OrthoFinder output from all 47 species | |
| Len_g00237 | No alias | assembly factor involved in RuBisCo assembly *(BSD2) &... | 0.05 | OrthoFinder output from all 47 species | |
| Lfl_g40205 | No alias | assembly factor involved in RuBisCo assembly *(BSD2) &... | 0.04 | OrthoFinder output from all 47 species | |
| Msp_g11910 | No alias | assembly factor involved in RuBisCo assembly *(BSD2) &... | 0.05 | OrthoFinder output from all 47 species | |
| Msp_g29361 | No alias | assembly factor involved in RuBisCo assembly *(BSD2) &... | 0.08 | OrthoFinder output from all 47 species | |
| Nbi_g01616 | No alias | assembly factor involved in RuBisCo assembly *(BSD2) &... | 0.11 | OrthoFinder output from all 47 species | |
| Ore_g07584 | No alias | assembly factor involved in RuBisCo assembly *(BSD2) &... | 0.06 | OrthoFinder output from all 47 species | |
| Ore_g07585 | No alias | assembly factor involved in RuBisCo assembly *(BSD2) &... | 0.08 | OrthoFinder output from all 47 species | |
| Pir_g60370 | No alias | assembly factor involved in RuBisCo assembly *(BSD2) &... | 0.05 | OrthoFinder output from all 47 species | |
| Pnu_g00272 | No alias | assembly factor involved in RuBisCo assembly *(BSD2) &... | 0.04 | OrthoFinder output from all 47 species | |
| Ppi_g57647 | No alias | assembly factor involved in RuBisCo assembly *(BSD2) &... | 0.05 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0085.g018366 | No alias | assembly factor involved in RuBisCo assembly *(BSD2) &... | 0.02 | OrthoFinder output from all 47 species | |
| Sam_g15087 | No alias | assembly factor involved in RuBisCo assembly *(BSD2) &... | 0.05 | OrthoFinder output from all 47 species | |
| Solyc12g009440.2.1 | Solyc12g009440 | BSD2 assembly factor involved in RuBisCo assembly | 0.04 | OrthoFinder output from all 47 species | |
| Spa_g03931 | No alias | assembly factor involved in RuBisCo assembly *(BSD2) &... | 0.07 | OrthoFinder output from all 47 species | |
| Tin_g09665 | No alias | assembly factor involved in RuBisCo assembly *(BSD2) &... | 0.06 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0002161 | aminoacyl-tRNA editing activity | IEP | HCCA |
| MF | GO:0003674 | molecular_function | IEP | HCCA |
| MF | GO:0003824 | catalytic activity | IEP | HCCA |
| MF | GO:0004325 | ferrochelatase activity | IEP | HCCA |
| BP | GO:0006399 | tRNA metabolic process | IEP | HCCA |
| BP | GO:0006418 | tRNA aminoacylation for protein translation | IEP | HCCA |
| BP | GO:0006725 | cellular aromatic compound metabolic process | IEP | HCCA |
| BP | GO:0006778 | porphyrin-containing compound metabolic process | IEP | HCCA |
| BP | GO:0006779 | porphyrin-containing compound biosynthetic process | IEP | HCCA |
| BP | GO:0006783 | heme biosynthetic process | IEP | HCCA |
| BP | GO:0006810 | transport | IEP | HCCA |
| MF | GO:0008942 | nitrite reductase [NAD(P)H] activity | IEP | HCCA |
| CC | GO:0016020 | membrane | IEP | HCCA |
| MF | GO:0016491 | oxidoreductase activity | IEP | HCCA |
| MF | GO:0016651 | oxidoreductase activity, acting on NAD(P)H | IEP | HCCA |
| MF | GO:0016655 | oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor | IEP | HCCA |
| MF | GO:0016661 | oxidoreductase activity, acting on other nitrogenous compounds as donors | IEP | HCCA |
| BP | GO:0033013 | tetrapyrrole metabolic process | IEP | HCCA |
| BP | GO:0033014 | tetrapyrrole biosynthetic process | IEP | HCCA |
| BP | GO:0034660 | ncRNA metabolic process | IEP | HCCA |
| BP | GO:0042168 | heme metabolic process | IEP | HCCA |
| BP | GO:0042440 | pigment metabolic process | IEP | HCCA |
| BP | GO:0043038 | amino acid activation | IEP | HCCA |
| BP | GO:0043039 | tRNA aminoacylation | IEP | HCCA |
| BP | GO:0046148 | pigment biosynthetic process | IEP | HCCA |
| BP | GO:0046483 | heterocycle metabolic process | IEP | HCCA |
| MF | GO:0046857 | oxidoreductase activity, acting on other nitrogenous compounds as donors, with NAD or NADP as acceptor | IEP | HCCA |
| MF | GO:0052689 | carboxylic ester hydrolase activity | IEP | HCCA |
| MF | GO:0098809 | nitrite reductase activity | IEP | HCCA |
| MF | GO:0140101 | catalytic activity, acting on a tRNA | IEP | HCCA |
| BP | GO:1901360 | organic cyclic compound metabolic process | IEP | HCCA |
No InterPro domains available for this sequence
| No external refs found! |