Description : not classified & original description: none
Gene families : OG0005853 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0005853_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | HRR: Aop_g25755 | |
Cluster | HCCA: Cluster_53 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
AT3G16840 | No alias | P-loop containing nucleoside triphosphate hydrolases... | 0.02 | OrthoFinder output from all 47 species | |
Adi_g110755 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Als_g15352 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Aob_g11499 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Azfi_s0123.g048442 | No alias | not classified & original description: CDS=180-2516 | 0.04 | OrthoFinder output from all 47 species | |
Ceric.13G087700.1 | Ceric.13G087700 | not classified & original description: pacid=50636878... | 0.03 | OrthoFinder output from all 47 species | |
Cpa|evm.model.tig00020943.85 | No alias | DEAD-box ATP-dependent RNA helicase 13 OS=Oryza sativa... | 0.03 | OrthoFinder output from all 47 species | |
Cre01.g022350 | No alias | DEAD-box ATP-dependent RNA helicase 13 OS=Arabidopsis thaliana | 0.03 | OrthoFinder output from all 47 species | |
Dcu_g01929 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
GSVIVT01027957001 | No alias | DEAD-box ATP-dependent RNA helicase 13 OS=Oryza sativa... | 0.03 | OrthoFinder output from all 47 species | |
LOC_Os04g43140.1 | LOC_Os04g43140 | DEAD-box ATP-dependent RNA helicase 13 OS=Oryza sativa... | 0.04 | OrthoFinder output from all 47 species | |
Mp5g03860.1 | No alias | DEAD-box ATP-dependent RNA helicase 13 OS=Oryza sativa... | 0.02 | OrthoFinder output from all 47 species | |
Ore_g32798 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Solyc09g090740.4.1 | Solyc09g090740 | DEAD-box ATP-dependent RNA helicase 13 OS=Oryza sativa... | 0.02 | OrthoFinder output from all 47 species | |
Zm00001e007582_P001 | Zm00001e007582 | DEAD-box ATP-dependent RNA helicase 13 OS=Oryza sativa... | 0.04 | OrthoFinder output from all 47 species |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0003676 | nucleic acid binding | IEA | Interproscan |
MF | GO:0005524 | ATP binding | IEA | Interproscan |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
CC | GO:0000439 | transcription factor TFIIH core complex | IEP | HCCA |
MF | GO:0001671 | ATPase activator activity | IEP | HCCA |
MF | GO:0004637 | phosphoribosylamine-glycine ligase activity | IEP | HCCA |
MF | GO:0004730 | pseudouridylate synthase activity | IEP | HCCA |
CC | GO:0005667 | transcription regulator complex | IEP | HCCA |
CC | GO:0005789 | endoplasmic reticulum membrane | IEP | HCCA |
BP | GO:0006139 | nucleobase-containing compound metabolic process | IEP | HCCA |
BP | GO:0006144 | purine nucleobase metabolic process | IEP | HCCA |
BP | GO:0006281 | DNA repair | IEP | HCCA |
BP | GO:0006289 | nucleotide-excision repair | IEP | HCCA |
BP | GO:0006351 | DNA-templated transcription | IEP | HCCA |
BP | GO:0006488 | dolichol-linked oligosaccharide biosynthetic process | IEP | HCCA |
BP | GO:0006490 | oligosaccharide-lipid intermediate biosynthetic process | IEP | HCCA |
BP | GO:0006629 | lipid metabolic process | IEP | HCCA |
BP | GO:0006725 | cellular aromatic compound metabolic process | IEP | HCCA |
BP | GO:0006974 | cellular response to DNA damage stimulus | IEP | HCCA |
BP | GO:0006996 | organelle organization | IEP | HCCA |
BP | GO:0007029 | endoplasmic reticulum organization | IEP | HCCA |
MF | GO:0008047 | enzyme activator activity | IEP | HCCA |
BP | GO:0008150 | biological_process | IEP | HCCA |
BP | GO:0008152 | metabolic process | IEP | HCCA |
BP | GO:0009112 | nucleobase metabolic process | IEP | HCCA |
BP | GO:0009113 | purine nucleobase biosynthetic process | IEP | HCCA |
BP | GO:0009987 | cellular process | IEP | HCCA |
MF | GO:0016835 | carbon-oxygen lyase activity | IEP | HCCA |
MF | GO:0016836 | hydro-lyase activity | IEP | HCCA |
MF | GO:0016879 | ligase activity, forming carbon-nitrogen bonds | IEP | HCCA |
BP | GO:0018130 | heterocycle biosynthetic process | IEP | HCCA |
MF | GO:0019208 | phosphatase regulator activity | IEP | HCCA |
MF | GO:0019211 | phosphatase activator activity | IEP | HCCA |
BP | GO:0019438 | aromatic compound biosynthetic process | IEP | HCCA |
CC | GO:0031090 | organelle membrane | IEP | HCCA |
BP | GO:0033554 | cellular response to stress | IEP | HCCA |
BP | GO:0044237 | cellular metabolic process | IEP | HCCA |
BP | GO:0044238 | primary metabolic process | IEP | HCCA |
BP | GO:0046112 | nucleobase biosynthetic process | IEP | HCCA |
BP | GO:0046483 | heterocycle metabolic process | IEP | HCCA |
BP | GO:0051716 | cellular response to stimulus | IEP | HCCA |
BP | GO:0071704 | organic substance metabolic process | IEP | HCCA |
BP | GO:0072522 | purine-containing compound biosynthetic process | IEP | HCCA |
BP | GO:0090304 | nucleic acid metabolic process | IEP | HCCA |
CC | GO:0090575 | RNA polymerase II transcription regulator complex | IEP | HCCA |
BP | GO:0097659 | nucleic acid-templated transcription | IEP | HCCA |
MF | GO:0098772 | molecular function regulator activity | IEP | HCCA |
MF | GO:0140677 | molecular function activator activity | IEP | HCCA |
BP | GO:1901360 | organic cyclic compound metabolic process | IEP | HCCA |
BP | GO:1901362 | organic cyclic compound biosynthetic process | IEP | HCCA |
BP | GO:1901576 | organic substance biosynthetic process | IEP | HCCA |
No external refs found! |