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  5. Aop_g25171

Aop_g25171 (TIM9, emb2474)


Aliases : TIM9, emb2474

Description : component *(Tim9) of inner mitochondrion membrane TIM22 insertion system & original description: none


Gene families : OG0006268 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0006268_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Aop_g25171
Cluster HCCA: Cluster_283

Target Alias Description ECC score Gene Family Method Actions
Ala_g24652 TIM9, emb2474 component *(Tim9) of inner mitochondrion membrane TIM22... 0.02 OrthoFinder output from all 47 species
Cpa|evm.model.tig00020710.89 TIM9, emb2474 Protein translocation.mitochondrion.inner mitochondrion... 0.01 OrthoFinder output from all 47 species
Cre01.g033400 TIM9, emb2474 Protein translocation.mitochondrion.inner mitochondrion... 0.02 OrthoFinder output from all 47 species
GSVIVT01034172001 No alias Protein translocation.mitochondrion.inner mitochondrion... 0.01 OrthoFinder output from all 47 species
Nbi_g28275 TIM9, emb2474 component *(Tim9) of inner mitochondrion membrane TIM22... 0.02 OrthoFinder output from all 47 species
Smo74249 TIM9, emb2474 Protein translocation.mitochondrion.inner mitochondrion... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000381 regulation of alternative mRNA splicing, via spliceosome IEP HCCA
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003723 RNA binding IEP HCCA
MF GO:0004812 aminoacyl-tRNA ligase activity IEP HCCA
MF GO:0005488 binding IEP HCCA
BP GO:0006399 tRNA metabolic process IEP HCCA
BP GO:0006405 RNA export from nucleus IEP HCCA
BP GO:0006406 mRNA export from nucleus IEP HCCA
BP GO:0006520 amino acid metabolic process IEP HCCA
BP GO:0006801 superoxide metabolic process IEP HCCA
BP GO:0006913 nucleocytoplasmic transport IEP HCCA
CC GO:0008541 proteasome regulatory particle, lid subcomplex IEP HCCA
BP GO:0015931 nucleobase-containing compound transport IEP HCCA
MF GO:0016874 ligase activity IEP HCCA
MF GO:0016875 ligase activity, forming carbon-oxygen bonds IEP HCCA
BP GO:0022607 cellular component assembly IEP HCCA
BP GO:0034660 ncRNA metabolic process IEP HCCA
BP GO:0043038 amino acid activation IEP HCCA
BP GO:0043039 tRNA aminoacylation IEP HCCA
MF GO:0043167 ion binding IEP HCCA
BP GO:0043248 proteasome assembly IEP HCCA
BP GO:0043484 regulation of RNA splicing IEP HCCA
BP GO:0043933 protein-containing complex organization IEP HCCA
BP GO:0048024 regulation of mRNA splicing, via spliceosome IEP HCCA
BP GO:0050657 nucleic acid transport IEP HCCA
BP GO:0050658 RNA transport IEP HCCA
BP GO:0050684 regulation of mRNA processing IEP HCCA
BP GO:0051028 mRNA transport IEP HCCA
BP GO:0051168 nuclear export IEP HCCA
BP GO:0051169 nuclear transport IEP HCCA
BP GO:0051236 establishment of RNA localization IEP HCCA
BP GO:0065003 protein-containing complex assembly IEP HCCA
BP GO:0072593 reactive oxygen species metabolic process IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:0140098 catalytic activity, acting on RNA IEP HCCA
MF GO:0140101 catalytic activity, acting on a tRNA IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
BP GO:1903311 regulation of mRNA metabolic process IEP HCCA
InterPro domains Description Start Stop
IPR004217 Tim10-like 78 138
No external refs found!