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  5. Aop_g24576

Aop_g24576


Description : EC_6.2 ligase forming carbon-sulfur bond & original description: none


Gene families : OG0004750 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004750_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Aop_g24576
Cluster HCCA: Cluster_96

Target Alias Description ECC score Gene Family Method Actions
Aspi01Gene13681.t1 Aspi01Gene13681 EC_6.2 ligase forming carbon-sulfur bond & original... 0.03 OrthoFinder output from all 47 species
Pir_g21816 No alias EC_6.2 ligase forming carbon-sulfur bond & original... 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003743 translation initiation factor activity IEP HCCA
MF GO:0004842 ubiquitin-protein transferase activity IEP HCCA
CC GO:0005575 cellular_component IEP HCCA
CC GO:0005634 nucleus IEP HCCA
CC GO:0005737 cytoplasm IEP HCCA
CC GO:0005852 eukaryotic translation initiation factor 3 complex IEP HCCA
BP GO:0006413 translational initiation IEP HCCA
BP GO:0006457 protein folding IEP HCCA
MF GO:0008135 translation factor activity, RNA binding IEP HCCA
CC GO:0016272 prefoldin complex IEP HCCA
BP GO:0016567 protein ubiquitination IEP HCCA
MF GO:0019787 ubiquitin-like protein transferase activity IEP HCCA
BP GO:0032446 protein modification by small protein conjugation IEP HCCA
CC GO:0032991 protein-containing complex IEP HCCA
CC GO:0043227 membrane-bounded organelle IEP HCCA
CC GO:0043231 intracellular membrane-bounded organelle IEP HCCA
MF GO:0045182 translation regulator activity IEP HCCA
MF GO:0051082 unfolded protein binding IEP HCCA
BP GO:0070647 protein modification by small protein conjugation or removal IEP HCCA
MF GO:0090079 translation regulator activity, nucleic acid binding IEP HCCA
InterPro domains Description Start Stop
IPR005811 CoA_ligase 184 309
IPR003781 CoA-bd 39 131
No external refs found!