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  5. Aop_g21088

Aop_g21088


Description : E3 ubiquitin ligase & original description: none


Gene families : OG0000370 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000370_tree

Sequence : coding (download), protein (download)


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Type Description Actions
Neighborhood HRR: Aop_g21088

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00066p00203490 evm_27.TU.AmTr_v1... Protein degradation.peptide tagging.Ubiquitin... 0.02 OrthoFinder output from all 47 species
AT4G02075 PIT1 RING/FYVE/PHD zinc finger superfamily protein 0.04 OrthoFinder output from all 47 species
Ceric.11G023000.1 Ceric.11G023000 E3 ubiquitin ligase & original description:... 0.02 OrthoFinder output from all 47 species
Ceric.16G007100.1 Ceric.16G007100 E3 ubiquitin ligase & original description:... 0.05 OrthoFinder output from all 47 species
Dde_g24961 No alias E3 ubiquitin ligase & original description: none 0.04 OrthoFinder output from all 47 species
LOC_Os05g47900.1 LOC_Os05g47900 RING-v-class E3 ligase 0.02 OrthoFinder output from all 47 species
Msp_g06322 No alias E3 ubiquitin ligase & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g18351 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g34835 No alias E3 ubiquitin ligase & original description: none 0.05 OrthoFinder output from all 47 species
Solyc01g079530.4.1 Solyc01g079530 RING-v-class E3 ligase 0.03 OrthoFinder output from all 47 species
Solyc06g069780.4.1 Solyc06g069780 RING-v-class E3 ligase 0.03 OrthoFinder output from all 47 species
Spa_g18823 No alias E3 ubiquitin ligase & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g10556 No alias E3 ubiquiTin ligase & original description: none 0.06 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0008270 zinc ion binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004175 endopeptidase activity IEP HCCA
MF GO:0004252 serine-type endopeptidase activity IEP HCCA
MF GO:0008233 peptidase activity IEP HCCA
MF GO:0008236 serine-type peptidase activity IEP HCCA
CC GO:0016020 membrane IEP HCCA
MF GO:0017171 serine hydrolase activity IEP HCCA
MF GO:0140096 catalytic activity, acting on a protein IEP HCCA
InterPro domains Description Start Stop
IPR011016 Znf_RING-CH 98 143
IPR022143 DUF3675 150 263
No external refs found!