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  5. Lfl_g10572

Lfl_g10572


Description : not classified & original description: none


Gene families : OG0000101 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000101_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Lfl_g10572

Target Alias Description ECC score Gene Family Method Actions
Adi_g017488 No alias RING-H2-class BTL-subclass E3 ubiquitin ligase &... 0.04 OrthoFinder output from all 47 species
Adi_g088761 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g03741 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g14925 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene33056.t1 Aspi01Gene33056 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.35G016600.1 Ceric.35G016600 not classified & original description: pacid=50582007... 0.03 OrthoFinder output from all 47 species
Dcu_g05540 No alias RING-H2-class BTL-subclass E3 ubiquitin ligase &... 0.03 OrthoFinder output from all 47 species
Ehy_g01127 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g30061 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g22017 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g02310 No alias RING-H2-class BTL-subclass E3 ubiquitin ligase &... 0.04 OrthoFinder output from all 47 species
Ore_g10220 No alias RING-H2-class BTL-subclass E3 ubiquitin ligase &... 0.03 OrthoFinder output from all 47 species
Ore_g23014 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g00737 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0061630 ubiquitin protein ligase activity IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003712 transcription coregulator activity IEP HCCA
BP GO:0006357 regulation of transcription by RNA polymerase II IEP HCCA
CC GO:0016592 mediator complex IEP HCCA
MF GO:0016829 lyase activity IEP HCCA
MF GO:0016840 carbon-nitrogen lyase activity IEP HCCA
MF GO:0016843 amine-lyase activity IEP HCCA
MF GO:0016844 strictosidine synthase activity IEP HCCA
CC GO:0140513 nuclear protein-containing complex IEP HCCA
InterPro domains Description Start Stop
IPR039525 RNF126-like_zinc-ribbon 8 38
IPR001841 Znf_RING 207 249
No external refs found!