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  5. Aop_g17469

Aop_g17469


Description : not classified & original description: none


Gene families : OG0000560 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000560_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Aop_g17469
Cluster HCCA: Cluster_94

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00024p00182360 evm_27.TU.AmTr_v1... No description available 0.03 OrthoFinder output from all 47 species
Adi_g011402 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Ala_g16202 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g32637 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Cba_g09315 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.12G020700.1 Ceric.12G020700 not classified & original description: pacid=50601572... 0.08 OrthoFinder output from all 47 species
Dac_g09824 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g36508 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g07960 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g16504 No alias not classified & original description: none 0.08 OrthoFinder output from all 47 species
Dcu_g16509 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Ehy_g00746 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Gb_19284 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
LOC_Os08g36030.1 LOC_Os08g36030 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
LOC_Os09g27250.1 LOC_Os09g27250 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
LOC_Os11g40570.1 LOC_Os11g40570 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
MA_10429075g0010 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
MA_10430743g0010 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
MA_129856g0010 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
MA_135096g0010 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
MA_9590976g0010 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Mp5g11410.1 No alias no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Pir_g21637 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g40773 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g20294 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0065.g015926 No alias not classified & original description: CDS=139-990 0.03 OrthoFinder output from all 47 species
Solyc01g006050.2.1 Solyc01g006050 no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
Solyc10g050430.1.1 Solyc10g050430 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Spa_g13080 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g56222 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e030554_P001 Zm00001e030554 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Zm00001e034292_P001 Zm00001e034292 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEP HCCA
BP GO:0006355 regulation of DNA-templated transcription IEP HCCA
BP GO:0006950 response to stress IEP HCCA
BP GO:0006952 defense response IEP HCCA
BP GO:0007034 vacuolar transport IEP HCCA
BP GO:0008150 biological_process IEP HCCA
BP GO:0009889 regulation of biosynthetic process IEP HCCA
BP GO:0010468 regulation of gene expression IEP HCCA
BP GO:0010556 regulation of macromolecule biosynthetic process IEP HCCA
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP HCCA
BP GO:0019222 regulation of metabolic process IEP HCCA
BP GO:0031323 regulation of cellular metabolic process IEP HCCA
BP GO:0031326 regulation of cellular biosynthetic process IEP HCCA
MF GO:0043565 sequence-specific DNA binding IEP HCCA
BP GO:0046907 intracellular transport IEP HCCA
BP GO:0050789 regulation of biological process IEP HCCA
BP GO:0050794 regulation of cellular process IEP HCCA
BP GO:0050896 response to stimulus IEP HCCA
BP GO:0051171 regulation of nitrogen compound metabolic process IEP HCCA
BP GO:0051252 regulation of RNA metabolic process IEP HCCA
BP GO:0051641 cellular localization IEP HCCA
BP GO:0051649 establishment of localization in cell IEP HCCA
BP GO:0060255 regulation of macromolecule metabolic process IEP HCCA
BP GO:0065007 biological regulation IEP HCCA
BP GO:0080090 regulation of primary metabolic process IEP HCCA
MF GO:0140110 transcription regulator activity IEP HCCA
BP GO:1903506 regulation of nucleic acid-templated transcription IEP HCCA
BP GO:2001141 regulation of RNA biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR006904 DUF716 133 267
No external refs found!