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  5. Aop_g15509

Aop_g15509


Description : T2-type RNase *(RNS) & original description: none


Gene families : OG0001771 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001771_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Aop_g15509

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00064p00084600 evm_27.TU.AmTr_v1... Ribonuclease 1 OS=Arabidopsis thaliana 0.06 OrthoFinder output from all 47 species
Aspi01Gene00279.t1 ATRNS1, RNS1,... T2-type RNase *(RNS) & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0007.g011037 ATRNS1, RNS1 T2-type RNase *(RNS) & original description: CDS=123-812 0.03 OrthoFinder output from all 47 species
Ceric.22G011400.1 ATRNS1, RNS1,... T2-type RNase *(RNS) & original description:... 0.01 OrthoFinder output from all 47 species
Dac_g08595 ATRNS1, RNS1 T2-type RNase *(RNS) & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g17901 No alias T2-type RNase *(RNS) & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g18235 No alias T2-type RNase *(RNS) & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g11678 RNS2 T2-type RNase *(RNS) & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01010088001 No alias Extracellular ribonuclease LE OS=Solanum lycopersicum 0.03 OrthoFinder output from all 47 species
GSVIVT01010193001 ATRNS1, RNS1 Extracellular ribonuclease LE OS=Solanum lycopersicum 0.02 OrthoFinder output from all 47 species
GSVIVT01019974001 ATRNS1, RNS1 Extracellular ribonuclease LE OS=Solanum lycopersicum 0.03 OrthoFinder output from all 47 species
Gb_27893 ATRNS1, RNS1 Ribonuclease 1 OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species
Gb_30835 ATRNS1, RNS1 Ribonuclease 1 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Gb_30836 ATRNS1, RNS1 Ribonuclease 1 OS=Arabidopsis thaliana... 0.05 OrthoFinder output from all 47 species
Gb_38141 ATRNS1, RNS1 Ribonuclease 1 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
LOC_Os01g67190.1 RNS2, LOC_Os01g67190 Ribonuclease 2 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
LOC_Os07g43600.1 ATRNS1, RNS1,... Intracellular ribonuclease LX OS=Solanum lycopersicum... 0.01 OrthoFinder output from all 47 species
LOC_Os07g43670.1 ATRNS1, RNS1,... Ribonuclease 1 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
LOC_Os08g33710.1 RNS3, LOC_Os08g33710 Extracellular ribonuclease LE OS=Solanum lycopersicum... 0.02 OrthoFinder output from all 47 species
LOC_Os09g36700.1 LOC_Os09g36700 Ribonuclease 1 OS=Arabidopsis thaliana... 0.01 OrthoFinder output from all 47 species
MA_10284254g0010 No alias no hits & (original description: none) 0.01 OrthoFinder output from all 47 species
MA_10433186g0010 ATRNS1, RNS1 Ribonuclease 1 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
MA_4032367g0010 RNS3 Ribonuclease 3 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
MA_95383g0020 ATRNS1, RNS1 Ribonuclease 1 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Mp2g08570.1 ATRNS1, RNS1 Ribonuclease 1 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Msp_g44320 ATRNS1, RNS1 T2-type RNase *(RNS) & original description: none 0.03 OrthoFinder output from all 47 species
Smo407198 No alias No description available 0.03 OrthoFinder output from all 47 species
Solyc04g005640.3.1 Solyc04g005640 Intracellular ribonuclease LX OS=Solanum lycopersicum... 0.06 OrthoFinder output from all 47 species
Solyc05g007940.3.1 ATRNS1, RNS1,... Intracellular ribonuclease LX OS=Solanum lycopersicum... 0.03 OrthoFinder output from all 47 species
Solyc05g007950.4.1 ATRNS1, RNS1,... Extracellular ribonuclease LE OS=Solanum lycopersicum... 0.02 OrthoFinder output from all 47 species
Solyc07g006560.3.1 Solyc07g006560 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEA Interproscan
MF GO:0033897 ribonuclease T2 activity IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004097 catechol oxidase activity IEP HCCA
MF GO:0004601 peroxidase activity IEP HCCA
MF GO:0005199 structural constituent of cell wall IEP HCCA
BP GO:0006631 fatty acid metabolic process IEP HCCA
BP GO:0006633 fatty acid biosynthetic process IEP HCCA
BP GO:0006950 response to stress IEP HCCA
BP GO:0006979 response to oxidative stress IEP HCCA
BP GO:0008610 lipid biosynthetic process IEP HCCA
BP GO:0016053 organic acid biosynthetic process IEP HCCA
MF GO:0016209 antioxidant activity IEP HCCA
MF GO:0016491 oxidoreductase activity IEP HCCA
MF GO:0016679 oxidoreductase activity, acting on diphenols and related substances as donors IEP HCCA
MF GO:0016682 oxidoreductase activity, acting on diphenols and related substances as donors, oxygen as acceptor IEP HCCA
MF GO:0016684 oxidoreductase activity, acting on peroxide as acceptor IEP HCCA
MF GO:0016747 acyltransferase activity, transferring groups other than amino-acyl groups IEP HCCA
MF GO:0030599 pectinesterase activity IEP HCCA
BP GO:0032787 monocarboxylic acid metabolic process IEP HCCA
BP GO:0042545 cell wall modification IEP HCCA
BP GO:0044255 cellular lipid metabolic process IEP HCCA
BP GO:0044283 small molecule biosynthetic process IEP HCCA
BP GO:0045229 external encapsulating structure organization IEP HCCA
BP GO:0046394 carboxylic acid biosynthetic process IEP HCCA
MF GO:0052689 carboxylic ester hydrolase activity IEP HCCA
BP GO:0071554 cell wall organization or biogenesis IEP HCCA
BP GO:0071555 cell wall organization IEP HCCA
BP GO:0072330 monocarboxylic acid biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR001568 RNase_T2-like 18 185
No external refs found!