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  5. Lfl_g10138

Lfl_g10138


Description : not classified & original description: none


Gene families : OG0005222 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0005222_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Lfl_g10138
Cluster HCCA: Cluster_115

Target Alias Description ECC score Gene Family Method Actions
AT2G35290 No alias unknown protein; Has 39 Blast hits to 39 proteins in 10... 0.05 OrthoFinder output from all 47 species
Ala_g08998 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g36451 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.21G049400.1 Ceric.21G049400 not classified & original description: pacid=50602938... 0.07 OrthoFinder output from all 47 species
Ehy_g02032 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
LOC_Os03g07400.1 LOC_Os03g07400 no hits & (original description: none) 0.06 OrthoFinder output from all 47 species
LOC_Os12g25770.1 LOC_Os12g25770 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Msp_g05881 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Nbi_g01654 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ore_g20642 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Sacu_v1.1_s0154.g023587 No alias not classified & original description: CDS=1-486 0.03 OrthoFinder output from all 47 species
Solyc08g077020.1.1 Solyc08g077020 no hits & (original description: none) 0.06 OrthoFinder output from all 47 species
Spa_g05816 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003677 DNA binding IEP HCCA
MF GO:0003700 DNA-binding transcription factor activity IEP HCCA
BP GO:0006355 regulation of DNA-templated transcription IEP HCCA
BP GO:0008150 biological_process IEP HCCA
BP GO:0009889 regulation of biosynthetic process IEP HCCA
BP GO:0010468 regulation of gene expression IEP HCCA
BP GO:0010556 regulation of macromolecule biosynthetic process IEP HCCA
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP HCCA
BP GO:0019222 regulation of metabolic process IEP HCCA
BP GO:0031323 regulation of cellular metabolic process IEP HCCA
BP GO:0031326 regulation of cellular biosynthetic process IEP HCCA
MF GO:0043565 sequence-specific DNA binding IEP HCCA
BP GO:0050789 regulation of biological process IEP HCCA
BP GO:0050794 regulation of cellular process IEP HCCA
BP GO:0051171 regulation of nitrogen compound metabolic process IEP HCCA
BP GO:0051252 regulation of RNA metabolic process IEP HCCA
BP GO:0060255 regulation of macromolecule metabolic process IEP HCCA
BP GO:0065007 biological regulation IEP HCCA
BP GO:0080090 regulation of primary metabolic process IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:0140110 transcription regulator activity IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
BP GO:1903506 regulation of nucleic acid-templated transcription IEP HCCA
BP GO:2001141 regulation of RNA biosynthetic process IEP HCCA

No InterPro domains available for this sequence

No external refs found!