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  5. Aop_g13526

Aop_g13526 (SRO1)


Aliases : SRO1

Description : organellar-signalling mediator *(RCD1) & original description: none


Gene families : OG0000733 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000733_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Aop_g13526

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00058p00198960 SRO2,... Probable inactive poly [ADP-ribose] polymerase SRO2... 0.02 OrthoFinder output from all 47 species
AT1G32230 AtRCD1, RCD1,... WWE protein-protein interaction domain protein family 0.03 OrthoFinder output from all 47 species
Ala_g06370 SRO3 organellar-signalling mediator *(RCD1) & original... 0.03 OrthoFinder output from all 47 species
Als_g44313 SRO1 organellar-signalling mediator *(RCD1) & original... 0.02 OrthoFinder output from all 47 species
Als_g48040 SRO1 organellar-signalling mediator *(RCD1) & original... 0.03 OrthoFinder output from all 47 species
Ceric.29G059600.1 AtRCD1, RCD1,... not classified & original description: pacid=50625179... 0.02 OrthoFinder output from all 47 species
Ceric.35G050900.1 SRO1, Ceric.35G050900 organellar-signalling mediator *(RCD1) & original... 0.03 OrthoFinder output from all 47 species
Dde_g11890 SRO2 organellar-signalling mediator *(RCD1) & original... 0.04 OrthoFinder output from all 47 species
Dde_g19324 SRO1 organellar-signalling mediator *(RCD1) & original... 0.03 OrthoFinder output from all 47 species
Ehy_g03940 SRO2 organellar-signalling mediator *(RCD1) & original... 0.02 OrthoFinder output from all 47 species
GSVIVT01007754001 SRO5 Probable inactive poly [ADP-ribose] polymerase SRO2... 0.03 OrthoFinder output from all 47 species
Gb_33339 SRO1 Probable inactive poly [ADP-ribose] polymerase SRO1... 0.04 OrthoFinder output from all 47 species
LOC_Os03g12820.1 SRO2, LOC_Os03g12820 Probable inactive poly [ADP-ribose] polymerase SRO2... 0.02 OrthoFinder output from all 47 species
Len_g20718 SRO3 organellar-signalling mediator *(RCD1) & original... 0.02 OrthoFinder output from all 47 species
Msp_g03984 AtRCD1, RCD1,... organellar-signalling mediator *(RCD1) & original... 0.05 OrthoFinder output from all 47 species
Nbi_g05846 SRO1 organellar-signalling mediator *(RCD1) & original... 0.05 OrthoFinder output from all 47 species
Pir_g10863 SRO1 organellar-signalling mediator *(RCD1) & original... 0.03 OrthoFinder output from all 47 species
Pnu_g25860 AtRCD1, RCD1,... organellar-signalling mediator *(RCD1) & original... 0.03 OrthoFinder output from all 47 species
Ppi_g31243 SRO1 organellar-signalling mediator *(RCD1) & original... 0.04 OrthoFinder output from all 47 species
Solyc03g114360.4.1 SRO5, Solyc03g114360 Probable inactive poly [ADP-ribose] polymerase SRO5... 0.02 OrthoFinder output from all 47 species
Solyc06g066330.3.1 AtRCD1, RCD1,... Inactive poly [ADP-ribose] polymerase RCD1... 0.03 OrthoFinder output from all 47 species
Solyc08g076420.3.1 AtRCD1, RCD1,... Inactive poly [ADP-ribose] polymerase RCD1... 0.03 OrthoFinder output from all 47 species
Zm00001e038639_P002 SRO2, Zm00001e038639 Probable inactive poly [ADP-ribose] polymerase SRO2... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003950 NAD+ ADP-ribosyltransferase activity IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004842 ubiquitin-protein transferase activity IEP HCCA
BP GO:0008104 protein localization IEP HCCA
BP GO:0015031 protein transport IEP HCCA
BP GO:0016567 protein ubiquitination IEP HCCA
MF GO:0019787 ubiquitin-like protein transferase activity IEP HCCA
BP GO:0032446 protein modification by small protein conjugation IEP HCCA
BP GO:0033036 macromolecule localization IEP HCCA
BP GO:0036211 protein modification process IEP HCCA
BP GO:0043412 macromolecule modification IEP HCCA
MF GO:0043565 sequence-specific DNA binding IEP HCCA
BP GO:0045184 establishment of protein localization IEP HCCA
BP GO:0070647 protein modification by small protein conjugation or removal IEP HCCA
BP GO:0070727 cellular macromolecule localization IEP HCCA
MF GO:0140096 catalytic activity, acting on a protein IEP HCCA
InterPro domains Description Start Stop
IPR012317 Poly(ADP-ribose)pol_cat_dom 298 395
IPR022003 RST 490 554
IPR004170 WWE-dom 58 112
No external refs found!