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  5. Aop_g13234

Aop_g13234


Description : EC_5.2 cis-trans-isomerase & original description: none


Gene families : OG0000219 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000219_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Aop_g13234
Cluster HCCA: Cluster_53

Target Alias Description ECC score Gene Family Method Actions
Ala_g06025 No alias EC_5.2 cis-trans-isomerase & original description: none 0.03 OrthoFinder output from all 47 species
Als_g11199 No alias EC_5.2 cis-trans-isomerase & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g11313 No alias EC_5.2 cis-trans-isomerase & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g08725 No alias EC_5.2 cis-trans-isomerase & original description: none 0.05 OrthoFinder output from all 47 species
Cba_g31945 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.01G091900.1 Ceric.01G091900 EC_5.2 cis-trans-isomerase & original description:... 0.01 OrthoFinder output from all 47 species
Ceric.21G017200.1 Ceric.21G017200 EC_5.2 cis-trans-isomerase & original description:... 0.03 OrthoFinder output from all 47 species
Cre06.g284900 CYP5, ATCYP5, CYP19-4 Protein modification.protein folding and quality... 0.02 OrthoFinder output from all 47 species
Dcu_g10578 No alias EC_5.2 cis-trans-isomerase & original description: none 0.1 OrthoFinder output from all 47 species
Dde_g06988 No alias EC_5.2 cis-trans-isomerase & original description: none 0.06 OrthoFinder output from all 47 species
LOC_Os07g08190.1 LOC_Os07g08190 protein folding catalyst 0.02 OrthoFinder output from all 47 species
Len_g18305 No alias EC_5.2 cis-trans-isomerase & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g10322 No alias EC_5.2 cis-trans-isomerase & original description: none 0.05 OrthoFinder output from all 47 species
Sam_g07188 No alias EC_5.2 cis-trans-isomerase & original description: none 0.03 OrthoFinder output from all 47 species
Smo229229 ATCYP20-2, CYP20-2 Protein modification.protein folding and quality... 0.02 OrthoFinder output from all 47 species
Spa_g41136 No alias EC_5.2 cis-trans-isomerase & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g14336 No alias EC_5.2 cis-trans-isomerase & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g19382 No alias EC_5.2 cis-trans-isomerase & original description: none 0.02 OrthoFinder output from all 47 species
Zm00001e035998_P001 Zm00001e035998 protein folding catalyst 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
BP GO:0000413 protein peptidyl-prolyl isomerization IEA Interproscan
MF GO:0003755 peptidyl-prolyl cis-trans isomerase activity IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000287 magnesium ion binding IEP HCCA
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003677 DNA binding IEP HCCA
MF GO:0003723 RNA binding IEP HCCA
MF GO:0003729 mRNA binding IEP HCCA
MF GO:0004743 pyruvate kinase activity IEP HCCA
MF GO:0004843 cysteine-type deubiquitinase activity IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005515 protein binding IEP HCCA
CC GO:0005685 U1 snRNP IEP HCCA
BP GO:0006090 pyruvate metabolic process IEP HCCA
BP GO:0006096 glycolytic process IEP HCCA
BP GO:0006165 nucleoside diphosphate phosphorylation IEP HCCA
BP GO:0006325 chromatin organization IEP HCCA
BP GO:0006338 chromatin remodeling IEP HCCA
BP GO:0006376 mRNA splice site selection IEP HCCA
BP GO:0006757 ATP generation from ADP IEP HCCA
BP GO:0009132 nucleoside diphosphate metabolic process IEP HCCA
BP GO:0009135 purine nucleoside diphosphate metabolic process IEP HCCA
BP GO:0009179 purine ribonucleoside diphosphate metabolic process IEP HCCA
BP GO:0009185 ribonucleoside diphosphate metabolic process IEP HCCA
BP GO:0016043 cellular component organization IEP HCCA
BP GO:0016052 carbohydrate catabolic process IEP HCCA
BP GO:0016579 protein deubiquitination IEP HCCA
MF GO:0019783 ubiquitin-like protein peptidase activity IEP HCCA
BP GO:0022613 ribonucleoprotein complex biogenesis IEP HCCA
BP GO:0022618 ribonucleoprotein complex assembly IEP HCCA
CC GO:0030532 small nuclear ribonucleoprotein complex IEP HCCA
CC GO:0030684 preribosome IEP HCCA
MF GO:0030955 potassium ion binding IEP HCCA
MF GO:0031072 heat shock protein binding IEP HCCA
MF GO:0031420 alkali metal ion binding IEP HCCA
CC GO:0032040 small-subunit processome IEP HCCA
CC GO:0032991 protein-containing complex IEP HCCA
BP GO:0042254 ribosome biogenesis IEP HCCA
BP GO:0043933 protein-containing complex organization IEP HCCA
BP GO:0044085 cellular component biogenesis IEP HCCA
BP GO:0046031 ADP metabolic process IEP HCCA
BP GO:0046939 nucleotide phosphorylation IEP HCCA
BP GO:0065003 protein-containing complex assembly IEP HCCA
BP GO:0070646 protein modification by small protein removal IEP HCCA
BP GO:0070647 protein modification by small protein conjugation or removal IEP HCCA
BP GO:0071826 ribonucleoprotein complex subunit organization IEP HCCA
BP GO:0071840 cellular component organization or biogenesis IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
CC GO:0097525 spliceosomal snRNP complex IEP HCCA
MF GO:0101005 deubiquitinase activity IEP HCCA
CC GO:0120114 Sm-like protein family complex IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
CC GO:1990904 ribonucleoprotein complex IEP HCCA
InterPro domains Description Start Stop
IPR002130 Cyclophilin-type_PPIase_dom 29 192
No external refs found!