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  5. Aop_g13024

Aop_g13024


Description : subunit gamma *(CCT3) of CCT chaperonin folding complex & original description: none


Gene families : OG0005075 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0005075_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Aop_g13024

Target Alias Description ECC score Gene Family Method Actions
AT5G26360 No alias TCP-1/cpn60 chaperonin family protein 0.02 OrthoFinder output from all 47 species
Als_g08312 No alias subunit gamma *(CCT3) of CCT chaperonin folding complex... 0.03 OrthoFinder output from all 47 species
Cpa|evm.model.tig00000615.79 No alias Cytoskeleton.actin and tubulin folding.CCT chaperonin... 0.02 OrthoFinder output from all 47 species
Cre10.g443250 No alias Cytoskeleton.actin and tubulin folding.CCT chaperonin... 0.04 OrthoFinder output from all 47 species
Dac_g00874 No alias subunit gamma *(CCT3) of CCT chaperonin folding complex... 0.04 OrthoFinder output from all 47 species
GSVIVT01007770001 No alias Cytoskeleton.actin and tubulin folding.CCT chaperonin... 0.02 OrthoFinder output from all 47 species
Gb_37345 No alias CCT3 subunit gamma of CCT chaperonin folding complex 0.03 OrthoFinder output from all 47 species
LOC_Os02g14929.1 LOC_Os02g14929 CCT3 subunit gamma of CCT chaperonin folding complex 0.05 OrthoFinder output from all 47 species
LOC_Os06g34690.1 LOC_Os06g34690 CCT3 subunit gamma of CCT chaperonin folding complex 0.06 OrthoFinder output from all 47 species
Len_g00631 No alias subunit gamma *(CCT3) of CCT chaperonin folding complex... 0.03 OrthoFinder output from all 47 species
Mp7g14360.1 No alias CCT3 subunit gamma of CCT chaperonin folding complex 0.02 OrthoFinder output from all 47 species
Nbi_g01088 No alias subunit gamma *(CCT3) of CCT chaperonin folding complex... 0.03 OrthoFinder output from all 47 species
Ore_g20439 No alias subunit gamma *(CCT3) of CCT chaperonin folding complex... 0.02 OrthoFinder output from all 47 species
Pp3c12_7550V3.1 Pp3c12_7550 TCP-1/cpn60 chaperonin family protein 0.02 OrthoFinder output from all 47 species
Sam_g15411 No alias subunit gamma *(CCT3) of CCT chaperonin folding complex... 0.05 OrthoFinder output from all 47 species
Solyc05g056310.3.1 Solyc05g056310 CCT3 subunit gamma of CCT chaperonin folding complex 0.03 OrthoFinder output from all 47 species
Spa_g00971 No alias subunit gamma *(CCT3) of CCT chaperonin folding complex... 0.05 OrthoFinder output from all 47 species
Tin_g01973 No alias subunit gamma *(CCT3) of CCT chaperonin folding complex... 0.04 OrthoFinder output from all 47 species
Zm00001e000822_P001 Zm00001e000822 CCT3 subunit gamma of CCT chaperonin folding complex 0.04 OrthoFinder output from all 47 species
Zm00001e024916_P001 Zm00001e024916 CCT3 subunit gamma of CCT chaperonin folding complex 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003743 translation initiation factor activity IEP HCCA
MF GO:0004486 methylenetetrahydrofolate dehydrogenase [NAD(P)+] activity IEP HCCA
MF GO:0004488 methylenetetrahydrofolate dehydrogenase (NADP+) activity IEP HCCA
MF GO:0004764 shikimate 3-dehydrogenase (NADP+) activity IEP HCCA
MF GO:0005515 protein binding IEP HCCA
CC GO:0005737 cytoplasm IEP HCCA
CC GO:0005852 eukaryotic translation initiation factor 3 complex IEP HCCA
CC GO:0005856 cytoskeleton IEP HCCA
CC GO:0005885 Arp2/3 protein complex IEP HCCA
BP GO:0006996 organelle organization IEP HCCA
BP GO:0007010 cytoskeleton organization IEP HCCA
BP GO:0007015 actin filament organization IEP HCCA
BP GO:0008104 protein localization IEP HCCA
BP GO:0016043 cellular component organization IEP HCCA
MF GO:0016491 oxidoreductase activity IEP HCCA
MF GO:0016614 oxidoreductase activity, acting on CH-OH group of donors IEP HCCA
MF GO:0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor IEP HCCA
MF GO:0016645 oxidoreductase activity, acting on the CH-NH group of donors IEP HCCA
MF GO:0016646 oxidoreductase activity, acting on the CH-NH group of donors, NAD or NADP as acceptor IEP HCCA
CC GO:0017119 Golgi transport complex IEP HCCA
BP GO:0030001 metal ion transport IEP HCCA
CC GO:0032991 protein-containing complex IEP HCCA
BP GO:0033036 macromolecule localization IEP HCCA
BP GO:0034314 Arp2/3 complex-mediated actin nucleation IEP HCCA
BP GO:0045010 actin nucleation IEP HCCA
BP GO:0045048 protein insertion into ER membrane IEP HCCA
BP GO:0045184 establishment of protein localization IEP HCCA
MF GO:0046873 metal ion transmembrane transporter activity IEP HCCA
BP GO:0051179 localization IEP HCCA
BP GO:0051205 protein insertion into membrane IEP HCCA
BP GO:0051234 establishment of localization IEP HCCA
MF GO:0051287 NAD binding IEP HCCA
BP GO:0051641 cellular localization IEP HCCA
BP GO:0051668 localization within membrane IEP HCCA
BP GO:0070727 cellular macromolecule localization IEP HCCA
BP GO:0071840 cellular component organization or biogenesis IEP HCCA
BP GO:0072657 protein localization to membrane IEP HCCA
BP GO:0090150 establishment of protein localization to membrane IEP HCCA
BP GO:0097435 supramolecular fiber organization IEP HCCA
CC GO:0099023 vesicle tethering complex IEP HCCA
InterPro domains Description Start Stop
IPR002423 Cpn60/GroEL/TCP-1 31 524
No external refs found!