Aliases : ATF1, TRXF1
Description : F-type thioredoxin *(Trx-F) & original description: none
Gene families : OG0001099 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001099_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | HRR: Aop_g11775 | |
Cluster | HCCA: Cluster_51 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
Aob_g02814 | TRXF2, ATF2 | F-type thioredoxin *(Trx-F) & original description: none | 0.07 | OrthoFinder output from all 47 species | |
Cba_g12466 | ATF1, TRXF1 | F-type thioredoxin *(Trx-F) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Ceric.37G049100.1 | ATHM4, TRX-M4,... | not classified & original description: pacid=50616292... | 0.03 | OrthoFinder output from all 47 species | |
Cre05.g243050 | TRXF2, ATF2 | Redox homeostasis.chloroplast redox homeostasis.F-type... | 0.02 | OrthoFinder output from all 47 species | |
Dcu_g26524 | ATF1, TRXF1 | F-type thioredoxin *(Trx-F) & original description: none | 0.04 | OrthoFinder output from all 47 species | |
Lfl_g11575 | ATF1, TRXF1 | F-type thioredoxin *(Trx-F) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
MA_5229g0010 | No alias | no hits & (original description: none) | 0.04 | OrthoFinder output from all 47 species | |
Ppi_g30576 | TRXF2, ATF2 | F-type thioredoxin *(Trx-F) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Sacu_v1.1_s0059.g015100 | TRXF2, ATF2 | F-type thioredoxin *(Trx-F) & original description: CDS=110-658 | 0.04 | OrthoFinder output from all 47 species | |
Sacu_v1.1_s0134.g022310 | ATF1, TRXF1 | F-type thioredoxin *(Trx-F) & original description: CDS=118-813 | 0.05 | OrthoFinder output from all 47 species | |
Spa_g30029 | ACHT3 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Spa_g51722 | ATF1, TRXF1 | F-type thioredoxin *(Trx-F) & original description: none | 0.03 | OrthoFinder output from all 47 species |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
No GO annotation available for this sequence |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0004175 | endopeptidase activity | IEP | HCCA |
MF | GO:0004222 | metalloendopeptidase activity | IEP | HCCA |
BP | GO:0006508 | proteolysis | IEP | HCCA |
BP | GO:0008104 | protein localization | IEP | HCCA |
MF | GO:0008233 | peptidase activity | IEP | HCCA |
MF | GO:0008237 | metallopeptidase activity | IEP | HCCA |
BP | GO:0015031 | protein transport | IEP | HCCA |
BP | GO:0033036 | macromolecule localization | IEP | HCCA |
BP | GO:0045184 | establishment of protein localization | IEP | HCCA |
BP | GO:0051641 | cellular localization | IEP | HCCA |
BP | GO:0070727 | cellular macromolecule localization | IEP | HCCA |
BP | GO:0071702 | organic substance transport | IEP | HCCA |
BP | GO:0071705 | nitrogen compound transport | IEP | HCCA |
InterPro domains | Description | Start | Stop |
---|---|---|---|
IPR013766 | Thioredoxin_domain | 79 | 179 |
No external refs found! |