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  5. Aop_g10069

Aop_g10069


Description : not classified & original description: none


Gene families : OG0008265 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0008265_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Aop_g10069
Cluster HCCA: Cluster_13

Target Alias Description ECC score Gene Family Method Actions
AT1G71730 No alias unknown protein; Has 52 Blast hits to 52 proteins in 24... 0.04 OrthoFinder output from all 47 species
Azfi_s0019.g015109 No alias not classified & original description: CDS=1-399 0.05 OrthoFinder output from all 47 species
Gb_01795 No alias no hits & (original description: none) 0.07 OrthoFinder output from all 47 species
Sacu_v1.1_s0049.g013647 No alias not classified & original description: CDS=1-336 0.03 OrthoFinder output from all 47 species
Zm00001e026831_P001 Zm00001e026831 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000491 small nucleolar ribonucleoprotein complex assembly IEP HCCA
BP GO:0000492 box C/D snoRNP assembly IEP HCCA
BP GO:0001510 RNA methylation IEP HCCA
MF GO:0003712 transcription coregulator activity IEP HCCA
BP GO:0006357 regulation of transcription by RNA polymerase II IEP HCCA
BP GO:0006396 RNA processing IEP HCCA
BP GO:0006399 tRNA metabolic process IEP HCCA
BP GO:0006400 tRNA modification IEP HCCA
BP GO:0008033 tRNA processing IEP HCCA
BP GO:0009451 RNA modification IEP HCCA
CC GO:0016592 mediator complex IEP HCCA
BP GO:0022607 cellular component assembly IEP HCCA
BP GO:0022618 ribonucleoprotein complex assembly IEP HCCA
BP GO:0030488 tRNA methylation IEP HCCA
CC GO:0031515 tRNA (m1A) methyltransferase complex IEP HCCA
BP GO:0032259 methylation IEP HCCA
CC GO:0032991 protein-containing complex IEP HCCA
BP GO:0034470 ncRNA processing IEP HCCA
BP GO:0034660 ncRNA metabolic process IEP HCCA
CC GO:0034708 methyltransferase complex IEP HCCA
BP GO:0043414 macromolecule methylation IEP HCCA
CC GO:0043527 tRNA methyltransferase complex IEP HCCA
BP GO:0043933 protein-containing complex organization IEP HCCA
BP GO:0065003 protein-containing complex assembly IEP HCCA
BP GO:0071826 ribonucleoprotein complex subunit organization IEP HCCA
CC GO:0140513 nuclear protein-containing complex IEP HCCA
CC GO:1990234 transferase complex IEP HCCA

No InterPro domains available for this sequence

No external refs found!