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  5. Aop_g09651

Aop_g09651


Description : DNA bending architectural protein *(HMG-B) & original description: none


Gene families : OG0000754 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000754_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Aop_g09651
Cluster HCCA: Cluster_262

Target Alias Description ECC score Gene Family Method Actions
Aspi01Gene04292.t2 Aspi01Gene04292 DNA bending architectural protein *(HMG-B) & original... 0.05 OrthoFinder output from all 47 species
Dcu_g07107 No alias DNA bending architectural protein *(HMG-B) & original... 0.03 OrthoFinder output from all 47 species
MA_390583g0010 No alias High mobility group B protein 15 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Pnu_g32059 No alias DNA bending architectural protein *(HMG-B) & original... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP HCCA
MF GO:0016746 acyltransferase activity IEP HCCA
MF GO:0016747 acyltransferase activity, transferring groups other than amino-acyl groups IEP HCCA
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP HCCA
MF GO:0050660 flavin adenine dinucleotide binding IEP HCCA
InterPro domains Description Start Stop
IPR009071 HMG_box_dom 442 506
IPR001606 ARID_dom 210 293
No external refs found!