Aop_g09593


Description : sporopollenin export factor *(IEF) & original description: none


Gene families : OG0005737 (OrthoFinder output from all 39 species) Phylogenetic Tree(s): OG0005737_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Aop_g09593
Cluster HCCA: Cluster_53

Target Alias Description ECC score Gene Family Method Actions
Aev_g03394 No alias sporopollenin export factor *(IEF) & original description: none 0.01 OrthoFinder output from all 39 species
Als_g09837 No alias sporopollenin export factor *(IEF) & original description: none 0.01 OrthoFinder output from all 39 species
Aspi01Gene32977.t1 Aspi01Gene32977 sporopollenin export factor *(IEF) & original description: none 0.01 OrthoFinder output from all 39 species
Azfi_s0087.g042349 No alias not classified & original description: CDS=122-1525 0.01 OrthoFinder output from all 39 species
Cba_g13782 No alias sporopollenin export factor *(IEF) & original description: none 0.01 OrthoFinder output from all 39 species
Ceric.05G095700.1 Ceric.05G095700 sporopollenin export factor *(IEF) & original... 0.02 OrthoFinder output from all 39 species
Dde_g05930 No alias sporopollenin export factor *(IEF) & original description: none 0.01 OrthoFinder output from all 39 species
Sacu_v1.1_s0014.g006229 No alias sporopollenin export factor *(IEF) & original... 0.01 OrthoFinder output from all 39 species
Spa_g31145 No alias sporopollenin export factor *(IEF) & original description: none 0.03 OrthoFinder output from all 39 species
Tin_g12803 No alias sporopollenin export factor *(IEF) & original description: none 0.02 OrthoFinder output from all 39 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
CC GO:0000347 THO complex IEP HCCA
CC GO:0000445 THO complex part of transcription export complex IEP HCCA
MF GO:0003743 translation initiation factor activity IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005525 GTP binding IEP HCCA
BP GO:0006396 RNA processing IEP HCCA
BP GO:0006397 mRNA processing IEP HCCA
BP GO:0006413 translational initiation IEP HCCA
MF GO:0008135 translation factor activity, RNA binding IEP HCCA
BP GO:0016071 mRNA metabolic process IEP HCCA
MF GO:0016779 nucleotidyltransferase activity IEP HCCA
MF GO:0019001 guanyl nucleotide binding IEP HCCA
MF GO:0032561 guanyl ribonucleotide binding IEP HCCA
MF GO:0045182 translation regulator activity IEP HCCA
MF GO:0090079 translation regulator activity, nucleic acid binding IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
CC GO:0140513 nuclear protein-containing complex IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA

No InterPro domains available for this sequence

No external refs found!