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  5. Aop_g06210

Aop_g06210 (EIF3C, EIF3C-1,...)


Aliases : EIF3C, EIF3C-1, ATTIF3C1, TIF3C1, ATEIF3C-1

Description : component *(eIF3c) of eIF3 mRNA-to-PIC binding complex & original description: none


Gene families : OG0003384 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003384_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Aop_g06210

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00019p00256050 EIF3C, EIF3C-1,... Protein biosynthesis.translation... 0.02 OrthoFinder output from all 47 species
AT3G56150 EIF3C, EIF3C-1,... eukaryotic translation initiation factor 3C 0.02 OrthoFinder output from all 47 species
Adi_g019682 EIF3C, EIF3C-1,... component *(eIF3c) of eIF3 mRNA-to-PIC binding complex &... 0.03 OrthoFinder output from all 47 species
Aob_g02318 EIF3C, EIF3C-1,... component *(eIF3c) of eIF3 mRNA-to-PIC binding complex &... 0.06 OrthoFinder output from all 47 species
Azfi_s0308.g064024 EIF3C, EIF3C-1,... component *(eIF3c) of eIF3 mRNA-to-PIC binding complex &... 0.03 OrthoFinder output from all 47 species
Cba_g11846 EIF3C, EIF3C-1,... component *(eIF3c) of eIF3 mRNA-to-PIC binding complex &... 0.04 OrthoFinder output from all 47 species
Ceric.11G061000.1 EIF3C, EIF3C-1,... component *(eIF3c) of eIF3 mRNA-to-PIC binding complex &... 0.03 OrthoFinder output from all 47 species
Cpa|evm.model.tig00000842.12 EIF3C, EIF3C-1,... Protein biosynthesis.translation... 0.03 OrthoFinder output from all 47 species
Cre04.g217550 EIF3C, EIF3C-1,... Protein biosynthesis.translation... 0.03 OrthoFinder output from all 47 species
Dde_g22171 EIF3C, EIF3C-1,... component *(eIF3c) of eIF3 mRNA-to-PIC binding complex &... 0.05 OrthoFinder output from all 47 species
Mp6g05320.1 EIF3C, EIF3C-1,... component eIF3c of eIF3 mRNA-to-PIC binding complex 0.02 OrthoFinder output from all 47 species
Ore_g17349 EIF3C, EIF3C-1,... component *(eIF3c) of eIF3 mRNA-to-PIC binding complex &... 0.03 OrthoFinder output from all 47 species
Pnu_g26058 EIF3C, EIF3C-1,... component *(eIF3c) of eIF3 mRNA-to-PIC binding complex &... 0.03 OrthoFinder output from all 47 species
Pnu_g31212 EIF3C, EIF3C-1,... component *(eIF3c) of eIF3 mRNA-to-PIC binding complex &... 0.03 OrthoFinder output from all 47 species
Pp3c13_10890V3.1 EIF3C, EIF3C-1,... eukaryotic translation initiation factor 3C 0.01 OrthoFinder output from all 47 species
Pp3c3_8500V3.1 EIF3C, EIF3C-1,... eukaryotic translation initiation factor 3C 0.01 OrthoFinder output from all 47 species
Sacu_v1.1_s0005.g002763 EIF3C, EIF3C-1,... component *(eIF3c) of eIF3 mRNA-to-PIC binding complex &... 0.02 OrthoFinder output from all 47 species
Sam_g37857 No alias component *(eIF3c) of eIF3 mRNA-to-PIC binding complex &... 0.03 OrthoFinder output from all 47 species
Solyc01g102590.3.1 EIF3C, EIF3C-1,... component eIF3c of eIF3 mRNA-to-PIC binding complex 0.04 OrthoFinder output from all 47 species
Spa_g12385 EIF3C, EIF3C-1,... component *(eIF3c) of eIF3 mRNA-to-PIC binding complex &... 0.04 OrthoFinder output from all 47 species
Spa_g22534 EIF3C, EIF3C-1,... component *(eIF3c) of eIF3 mRNA-to-PIC binding complex &... 0.05 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003743 translation initiation factor activity IEA Interproscan
CC GO:0005852 eukaryotic translation initiation factor 3 complex IEA Interproscan
BP GO:0006413 translational initiation IEA Interproscan
MF GO:0031369 translation initiation factor binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEP HCCA
CC GO:0005737 cytoplasm IEP HCCA
BP GO:0006886 intracellular protein transport IEP HCCA
BP GO:0008104 protein localization IEP HCCA
CC GO:0008303 caspase complex IEP HCCA
BP GO:0015031 protein transport IEP HCCA
BP GO:0016255 attachment of GPI anchor to protein IEP HCCA
MF GO:0019842 vitamin binding IEP HCCA
MF GO:0019899 enzyme binding IEP HCCA
MF GO:0030170 pyridoxal phosphate binding IEP HCCA
MF GO:0031267 small GTPase binding IEP HCCA
BP GO:0033036 macromolecule localization IEP HCCA
CC GO:0042765 GPI-anchor transamidase complex IEP HCCA
BP GO:0045184 establishment of protein localization IEP HCCA
BP GO:0046907 intracellular transport IEP HCCA
MF GO:0051020 GTPase binding IEP HCCA
BP GO:0051649 establishment of localization in cell IEP HCCA
MF GO:0070279 vitamin B6 binding IEP HCCA
BP GO:0070727 cellular macromolecule localization IEP HCCA
BP GO:0071702 organic substance transport IEP HCCA
BP GO:0071705 nitrogen compound transport IEP HCCA
CC GO:0140534 endoplasmic reticulum protein-containing complex IEP HCCA
CC GO:1902494 catalytic complex IEP HCCA
CC GO:1905368 peptidase complex IEP HCCA
CC GO:1905369 endopeptidase complex IEP HCCA
InterPro domains Description Start Stop
IPR000717 PCI_dom 670 798
IPR008905 EIF3C_N_dom 45 659
No external refs found!