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  5. Aop_g06123

Aop_g06123


Description : not classified & original description: none


Gene families : OG0001713 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001713_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Aop_g06123

Target Alias Description ECC score Gene Family Method Actions
Adi_g089012 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dac_g36523 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g01364 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g11753 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0048.g013530 No alias not classified & original description: CDS=375-2570 0.03 OrthoFinder output from all 47 species
Sam_g19775 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g05375 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g07441 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g22985 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Zm00001e000395_P001 Zm00001e000395 Protein KINESIN LIGHT CHAIN-RELATED 1 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000184 nuclear-transcribed mRNA catabolic process, nonsense-mediated decay IEP HCCA
BP GO:0000956 nuclear-transcribed mRNA catabolic process IEP HCCA
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003723 RNA binding IEP HCCA
MF GO:0005488 binding IEP HCCA
CC GO:0005634 nucleus IEP HCCA
BP GO:0006401 RNA catabolic process IEP HCCA
BP GO:0006402 mRNA catabolic process IEP HCCA
MF GO:0008094 ATP-dependent activity, acting on DNA IEP HCCA
BP GO:0009057 macromolecule catabolic process IEP HCCA
BP GO:0009892 negative regulation of metabolic process IEP HCCA
BP GO:0010605 negative regulation of macromolecule metabolic process IEP HCCA
BP GO:0010629 negative regulation of gene expression IEP HCCA
BP GO:0016071 mRNA metabolic process IEP HCCA
BP GO:0019439 aromatic compound catabolic process IEP HCCA
BP GO:0034655 nucleobase-containing compound catabolic process IEP HCCA
BP GO:0044248 cellular catabolic process IEP HCCA
BP GO:0044265 cellular macromolecule catabolic process IEP HCCA
BP GO:0044270 cellular nitrogen compound catabolic process IEP HCCA
BP GO:0046700 heterocycle catabolic process IEP HCCA
BP GO:0048519 negative regulation of biological process IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:0140097 catalytic activity, acting on DNA IEP HCCA
MF GO:0140658 ATP-dependent chromatin remodeler activity IEP HCCA
BP GO:1901361 organic cyclic compound catabolic process IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA

No InterPro domains available for this sequence

No external refs found!