Aop_g04361

Description : subunit delta *(CCT4) of CCT chaperonin folding complex & original description: none

Gene families : OG0005270 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0005270_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Aop_g04361

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00016p00145050	evm_27.TU.AmTr_v1...	Cytoskeleton.actin and tubulin folding.CCT chaperonin...	0.02	OrthoFinder output from all 47 species
AT3G18190	No alias	TCP-1/cpn60 chaperonin family protein	0.05	OrthoFinder output from all 47 species
Aev_g03918	No alias	subunit delta *(CCT4) of CCT chaperonin folding complex...	0.02	OrthoFinder output from all 47 species
Als_g13529	No alias	subunit delta *(CCT4) of CCT chaperonin folding complex...	0.04	OrthoFinder output from all 47 species
Cba_g04618	No alias	subunit delta *(CCT4) of CCT chaperonin folding complex...	0.04	OrthoFinder output from all 47 species
Ceric.29G021200.1	Ceric.29G021200	subunit delta *(CCT4) of CCT chaperonin folding complex...	0.02	OrthoFinder output from all 47 species
Cpa\|evm.model.tig00000842.25	No alias	Cytoskeleton.actin and tubulin folding.CCT chaperonin...	0.02	OrthoFinder output from all 47 species
Cre05.g234639	No alias	Cytoskeleton.actin and tubulin folding.CCT chaperonin...	0.02	OrthoFinder output from all 47 species
GSVIVT01008363001	No alias	Cytoskeleton.actin and tubulin folding.CCT chaperonin...	0.03	OrthoFinder output from all 47 species
Gb_12950	No alias	CCT4 subunit delta of CCT chaperonin folding complex	0.03	OrthoFinder output from all 47 species
LOC_Os02g22780.1	LOC_Os02g22780	CCT4 subunit delta of CCT chaperonin folding complex	0.05	OrthoFinder output from all 47 species
Lfl_g01553	No alias	subunit delta *(CCT4) of CCT chaperonin folding complex...	0.02	OrthoFinder output from all 47 species
MA_18588g0010	No alias	CCT4 subunit delta of CCT chaperonin folding complex	0.04	OrthoFinder output from all 47 species
Mp6g14150.1	No alias	CCT4 subunit delta of CCT chaperonin folding complex	0.04	OrthoFinder output from all 47 species
Pir_g04542	No alias	subunit delta *(CCT4) of CCT chaperonin folding complex...	0.03	OrthoFinder output from all 47 species
Pp3c22_2530V3.1	Pp3c22_2530	TCP-1/cpn60 chaperonin family protein	0.02	OrthoFinder output from all 47 species
Sam_g12483	No alias	subunit delta *(CCT4) of CCT chaperonin folding complex...	0.02	OrthoFinder output from all 47 species
Solyc03g118910.1.1	Solyc03g118910	CCT4 subunit delta of CCT chaperonin folding complex	0.03	OrthoFinder output from all 47 species
Spa_g12742	No alias	subunit delta *(CCT4) of CCT chaperonin folding complex...	0.1	OrthoFinder output from all 47 species
Tin_g00914	No alias	subunit delta *(CCT4) of CCT chaperonin folding complex...	0.04	OrthoFinder output from all 47 species
Zm00001e000128_P002	Zm00001e000128	CCT4 subunit delta of CCT chaperonin folding complex	0.05	OrthoFinder output from all 47 species
Zm00001e023455_P001	Zm00001e023455	CCT4 subunit delta of CCT chaperonin folding complex	0.02	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005524	ATP binding	IEA	Interproscan
MF	GO:0017076	purine nucleotide binding	None	Extended
MF	GO:0030554	adenyl nucleotide binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032559	adenyl ribonucleotide binding	None	Extended
MF	GO:0035639	purine ribonucleoside triphosphate binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0003676	nucleic acid binding	IEP	HCCA
MF	GO:0003712	transcription coregulator activity	IEP	HCCA
MF	GO:0003723	RNA binding	IEP	HCCA
CC	GO:0005737	cytoplasm	IEP	HCCA
BP	GO:0006352	DNA-templated transcription initiation	IEP	HCCA
BP	GO:0006357	regulation of transcription by RNA polymerase II	IEP	HCCA
BP	GO:0006457	protein folding	IEP	HCCA
MF	GO:0016462	pyrophosphatase activity	IEP	HCCA
CC	GO:0016592	mediator complex	IEP	HCCA
MF	GO:0016627	oxidoreductase activity, acting on the CH-CH group of donors	IEP	HCCA
MF	GO:0016817	hydrolase activity, acting on acid anhydrides	IEP	HCCA
MF	GO:0016818	hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides	IEP	HCCA
MF	GO:0016887	ATP hydrolysis activity	IEP	HCCA
MF	GO:0017111	ribonucleoside triphosphate phosphatase activity	IEP	HCCA
MF	GO:0044183	protein folding chaperone	IEP	HCCA
MF	GO:0051082	unfolded protein binding	IEP	HCCA
MF	GO:0140657	ATP-dependent activity	IEP	HCCA
MF	GO:0140662	ATP-dependent protein folding chaperone	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR002423	Cpn60/GroEL/TCP-1	33	527

External Links

No external refs found!

Aop_g04361

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation