Lfl_g08921 (MRP6, ATMRP6, ABCC8)

Aliases : MRP6, ATMRP6, ABCC8

Description : subfamily ABCC transporter & original description: none

Gene families : OG0000037 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Lfl_g08921
Cluster	HCCA: Cluster_83

Target	Alias	Description	ECC score	Gene Family Method
Adi_g011290	MRP6, ATMRP6, ABCC8	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Aev_g47598	ATMRP14, ABCC10, MRP14	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Aop_g07552	MRP11, ABCC13, ATMRP11	subfamily ABCC transporter & original description: none	0.03	OrthoFinder output from all 47 species
Aspi01Gene09685.t1	ATABCC5, MRP5,...	subfamily ABCC transporter & original description: none	0.04	OrthoFinder output from all 47 species
Aspi01Gene43482.t1	ATMRP12, MRP12,...	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Cba_g38039	MRP6, ATMRP6, ABCC8	subfamily ABCC transporter & original description: none	0.03	OrthoFinder output from all 47 species
Ceric.1Z046600.1	AtABCC2, ABCC2,...	glutathione S-conjugate transporter & original...	0.04	OrthoFinder output from all 47 species
Cpa\|evm.model.tig00000718.2	AtABCC2, ABCC2,...	ABC transporter C family member 2 OS=Arabidopsis thaliana	0.01	OrthoFinder output from all 47 species
Cpa\|evm.model.tig00000718.3	ATMRP8, MRP8, ABCC6	ABC transporter C family member 6 OS=Arabidopsis thaliana	0.01	OrthoFinder output from all 47 species
Cpa\|evm.model.tig00001024.2	AtABCC2, ABCC2,...	ABC transporter C family member 14 OS=Arabidopsis thaliana	0.02	OrthoFinder output from all 47 species
Cpa\|evm.model.tig00001729.6	ABCC1, ATABCC1,...	Solute transport.primary active transport.ABC...	0.01	OrthoFinder output from all 47 species
Cpa\|evm.model.tig00020553.190	ATABCC5, MRP5,...	ABC transporter C family member 4 OS=Arabidopsis thaliana	0.01	OrthoFinder output from all 47 species
Cpa\|evm.model.tig00020592.4	ATMRP12, MRP12, ABCC11	ABC transporter C family member 1 OS=Arabidopsis thaliana	0.01	OrthoFinder output from all 47 species
Dac_g12577	ATABCC5, MRP5,...	subfamily ABCC transporter & original description: none	0.03	OrthoFinder output from all 47 species
Dde_g09221	MRP10, ATMRP10, ABCC14	subfamily ABCC transporter & original description: none	0.02	OrthoFinder output from all 47 species
Gb_12836	ATMRP14, ABCC10, MRP14	ABC transporter C family member 10 OS=Arabidopsis...	0.02	OrthoFinder output from all 47 species
Lfl_g12212	ABCC3, ATMRP3, MRP3	subfamily ABCC transporter & original description: none	0.04	OrthoFinder output from all 47 species
MA_211762g0010	MRP10, ATMRP10, ABCC14	ABC transporter C family member 14 OS=Arabidopsis...	0.03	OrthoFinder output from all 47 species
Nbi_g22300	EST3, MRP4, ATMRP4, ABCC4	subfamily ABCC transporter & original description: none	0.02	OrthoFinder output from all 47 species
Nbi_g29837	MRP9, ABCC9, ATMRP9	subfamily ABCC transporter & original description: none	0.03	OrthoFinder output from all 47 species
Pnu_g08129	MRP6, ATMRP6, ABCC8	subfamily ABCC transporter & original description: none	0.06	OrthoFinder output from all 47 species
Sam_g08067	No alias	subfamily ABCC transporter & original description: none	0.02	OrthoFinder output from all 47 species
Sam_g29278	No alias	glutathione S-conjugate transporter & original description: none	0.02	OrthoFinder output from all 47 species
Sam_g50406	No alias	subfamily ABCC transporter & original description: none	0.02	OrthoFinder output from all 47 species
Spa_g13670	MRP6, ATMRP6, ABCC8	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Spa_g20006	EST3, MRP4, ATMRP4, ABCC4	not classified & original description: none	0.02	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005524	ATP binding	IEA	Interproscan
MF	GO:0017076	purine nucleotide binding	None	Extended
MF	GO:0030554	adenyl nucleotide binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032559	adenyl ribonucleotide binding	None	Extended
MF	GO:0035639	purine ribonucleoside triphosphate binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0000049	tRNA binding	IEP	HCCA
MF	GO:0004812	aminoacyl-tRNA ligase activity	IEP	HCCA
BP	GO:0006399	tRNA metabolic process	IEP	HCCA
MF	GO:0016874	ligase activity	IEP	HCCA
MF	GO:0016875	ligase activity, forming carbon-oxygen bonds	IEP	HCCA
MF	GO:0042626	ATPase-coupled transmembrane transporter activity	IEP	HCCA
BP	GO:0043038	amino acid activation	IEP	HCCA
BP	GO:0043039	tRNA aminoacylation	IEP	HCCA
MF	GO:0140101	catalytic activity, acting on a tRNA	IEP	HCCA
MF	GO:0140359	ABC-type transporter activity	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR011527	ABC1_TM_dom	106	371
IPR011527	ABC1_TM_dom	758	999
IPR003439	ABC_transporter-like_ATP-bd	467	601
IPR003439	ABC_transporter-like_ATP-bd	1088	1236

External Links

No external refs found!

Lfl_g08921 (MRP6, ATMRP6, ABCC8)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation