1. Home
  2. Species
  3. Amblovenatum opulentum
  4. Sequence
  5. Aop_g01990

Aop_g01990 (UBC9)


Aliases : UBC9

Description : E2 MUB ubiquitin-conjugating enzyme & original description: none


Gene families : OG0000200 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000200_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Aop_g01990
Cluster HCCA: Cluster_329

Target Alias Description ECC score Gene Family Method Actions
Als_g10989 UBC10 E2 MUB ubiquitin-conjugating enzyme & original description: none 0.03 OrthoFinder output from all 47 species
Gb_07763 EMB144, CIN4, COP10, FUS9 conjugation E2 protein. E2 conjugating component COP10... 0.03 OrthoFinder output from all 47 species
LOC_Os09g12230.1 ATUBC11, UBC11,... conjugation E2 protein 0.02 OrthoFinder output from all 47 species
Len_g28801 EMB144, CIN4, COP10, FUS9 component *(COP10) of CDDD substrate adaptor module of... 0.03 OrthoFinder output from all 47 species
Solyc10g011740.3.1 UBC10, Solyc10g011740 conjugation E2 protein 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
BP GO:0002097 tRNA wobble base modification IEP HCCA
BP GO:0002098 tRNA wobble uridine modification IEP HCCA
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003723 RNA binding IEP HCCA
MF GO:0005488 binding IEP HCCA
BP GO:0006139 nucleobase-containing compound metabolic process IEP HCCA
BP GO:0006396 RNA processing IEP HCCA
BP GO:0006397 mRNA processing IEP HCCA
BP GO:0006399 tRNA metabolic process IEP HCCA
BP GO:0006400 tRNA modification IEP HCCA
BP GO:0006725 cellular aromatic compound metabolic process IEP HCCA
BP GO:0008033 tRNA processing IEP HCCA
MF GO:0009055 electron transfer activity IEP HCCA
BP GO:0009451 RNA modification IEP HCCA
MF GO:0010181 FMN binding IEP HCCA
BP GO:0016070 RNA metabolic process IEP HCCA
BP GO:0016071 mRNA metabolic process IEP HCCA
CC GO:0033588 elongator holoenzyme complex IEP HCCA
BP GO:0034470 ncRNA processing IEP HCCA
BP GO:0034641 cellular nitrogen compound metabolic process IEP HCCA
BP GO:0034660 ncRNA metabolic process IEP HCCA
BP GO:0046483 heterocycle metabolic process IEP HCCA
BP GO:0090304 nucleic acid metabolic process IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
CC GO:0140535 intracellular protein-containing complex IEP HCCA
BP GO:1901360 organic cyclic compound metabolic process IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
InterPro domains Description Start Stop
IPR000608 UBQ-conjugat_E2 42 178
No external refs found!