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  5. Aop_g01767

Aop_g01767 (HSFA1B, ATHSF3, HSF3, ATHSFA1B)


Aliases : HSFA1B, ATHSF3, HSF3, ATHSFA1B

Description : transcriptional regulator *(HsfA1) & original description: none


Gene families : OG0000093 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000093_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Aop_g01767

Target Alias Description ECC score Gene Family Method Actions
AT3G24520 AT-HSFC1, HSFC1 heat shock transcription factor C1 0.03 OrthoFinder output from all 47 species
Aspi01Gene27811.t1 AT-HSFA6B,... HSF-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene30579.t1 HSFA1B, ATHSF3,... HSF-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g10301 HSFB4, SCZ, AT-HSFB4 HSF-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01024378001 No alias RNA biosynthesis.transcriptional activation.HSF (heat... 0.03 OrthoFinder output from all 47 species
LOC_Os01g54550.1 HSFA4C, RHA1,... transcription factor (HSF) 0.03 OrthoFinder output from all 47 species
Lfl_g12818 AT-HSFA6B, HSFA6B HSF-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g03551 ATHSF1, HSF1,... HSF-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g09931 HSFB4, SCZ, AT-HSFB4 HSF-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0034.g011210 ATHSF1, HSF1,... HSF-type transcription factor & original description:... 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0052.g014027 HSFB4, SCZ, AT-HSFB4 HSF-type transcription factor & original description: CDS=77-1222 0.04 OrthoFinder output from all 47 species
Solyc12g098520.2.1 AT-HSFA5, HSFA5,... transcription factor (HSF) 0.02 OrthoFinder output from all 47 species
Zm00001e006405_P001 HSFA1B, ATHSF3,... transcription factor (HSF). transcriptional regulator (HsfA1) 0.03 OrthoFinder output from all 47 species
Zm00001e011633_P001 HSFA1B, ATHSF3,... transcription factor (HSF). transcriptional regulator (HsfA1) 0.03 OrthoFinder output from all 47 species
Zm00001e029052_P001 HSFA4C, RHA1,... transcription factor (HSF) 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEA Interproscan
BP GO:0006355 regulation of DNA-templated transcription IEA Interproscan
MF GO:0043565 sequence-specific DNA binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003950 NAD+ ADP-ribosyltransferase activity IEP HCCA
MF GO:0008094 ATP-dependent activity, acting on DNA IEP HCCA
MF GO:0008270 zinc ion binding IEP HCCA
MF GO:0016763 pentosyltransferase activity IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0043169 cation binding IEP HCCA
MF GO:0046872 metal ion binding IEP HCCA
MF GO:0046914 transition metal ion binding IEP HCCA
MF GO:0140097 catalytic activity, acting on DNA IEP HCCA
MF GO:0140640 catalytic activity, acting on a nucleic acid IEP HCCA
MF GO:0140658 ATP-dependent chromatin remodeler activity IEP HCCA
InterPro domains Description Start Stop
IPR000232 HSF_DNA-bd 51 140
No external refs found!