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  5. Aop_g01728

Aop_g01728 (BPC3, ATBPC3)


Aliases : BPC3, ATBPC3

Description : BBR/BPC-type transcription factor & original description: none


Gene families : OG0000626 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000626_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Aop_g01728
Cluster HCCA: Cluster_53

Target Alias Description ECC score Gene Family Method Actions
Adi_g082066 BPC3, ATBPC3 BBR/BPC-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0385.g067505 ATBPC4, BPC4, BBR BBR/BPC-type transcription factor & original... 0.03 OrthoFinder output from all 47 species
Cba_g17226 ATBPC4, BPC4, BBR BBR/BPC-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g03708 ATBPC4, BPC4, BBR BBR/BPC-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g03032 BBR/BPC5, BPC5, ATBPC5 BBR/BPC-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g13421 BPC3, ATBPC3 BBR/BPC-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Solyc01g110470.3.1 ATBPC4, BPC4,... transcription factor (BBR/BPC) 0.02 OrthoFinder output from all 47 species
Solyc04g081170.3.1 BPC6, BBR/BPC6,... transcription factor (BBR/BPC) 0.03 OrthoFinder output from all 47 species
Spa_g05526 ATBPC4, BPC4, BBR BBR/BPC-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0004843 cysteine-type deubiquitinase activity IEP HCCA
CC GO:0005737 cytoplasm IEP HCCA
BP GO:0006488 dolichol-linked oligosaccharide biosynthetic process IEP HCCA
BP GO:0006490 oligosaccharide-lipid intermediate biosynthetic process IEP HCCA
BP GO:0006629 lipid metabolic process IEP HCCA
MF GO:0008234 cysteine-type peptidase activity IEP HCCA
MF GO:0010181 FMN binding IEP HCCA
BP GO:0016579 protein deubiquitination IEP HCCA
MF GO:0019783 ubiquitin-like protein peptidase activity IEP HCCA
BP GO:0044238 primary metabolic process IEP HCCA
BP GO:0044255 cellular lipid metabolic process IEP HCCA
BP GO:0070646 protein modification by small protein removal IEP HCCA
BP GO:0070647 protein modification by small protein conjugation or removal IEP HCCA
BP GO:0071704 organic substance metabolic process IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:0101005 deubiquitinase activity IEP HCCA
BP GO:1901135 carbohydrate derivative metabolic process IEP HCCA
BP GO:1901137 carbohydrate derivative biosynthetic process IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
InterPro domains Description Start Stop
IPR010409 GAGA-bd_tscrpt_act 1 305
No external refs found!