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  5. Aop_g00373

Aop_g00373 (PHB1, ATPHB1)


Aliases : PHB1, ATPHB1

Description : not classified & original description: none


Gene families : OG0002789 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002789_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Aop_g00373
Cluster HCCA: Cluster_283

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00058p00112040 PHB1, ATPHB1,... Prohibitin-1, mitochondrial OS=Arabidopsis thaliana 0.06 OrthoFinder output from all 47 species
AMTR_s00071p00140730 PHB1, ATPHB1,... Prohibitin-1, mitochondrial OS=Arabidopsis thaliana 0.05 OrthoFinder output from all 47 species
AT4G28510 PHB1, ATPHB1 prohibitin 1 0.04 OrthoFinder output from all 47 species
Adi_g023316 PHB1, ATPHB1 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g01193 PHB1, ATPHB1 not classified & original description: none 0.07 OrthoFinder output from all 47 species
Als_g23436 PHB1, ATPHB1 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Azfi_s0003.g007878 PHB1, ATPHB1 not classified & original description: CDS=220-1083 0.05 OrthoFinder output from all 47 species
Cba_g14780 PHB1, ATPHB1 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ceric.02G011500.1 PHB1, ATPHB1,... not classified & original description: pacid=50584039... 0.05 OrthoFinder output from all 47 species
Cre02.g088000 PHB1, ATPHB1 Prohibitin-1, mitochondrial OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
GSVIVT01027465001 PHB1, ATPHB1 Prohibitin-1, mitochondrial OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
GSVIVT01036736001 PHB1, ATPHB1 Prohibitin-1, mitochondrial OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
Gb_24064 PHB1, ATPHB1 Prohibitin-1, mitochondrial OS=Arabidopsis thaliana... 0.05 OrthoFinder output from all 47 species
LOC_Os07g15880.1 PHB2, ATPHB2,... Prohibitin-2, mitochondrial OS=Arabidopsis thaliana... 0.08 OrthoFinder output from all 47 species
Len_g48441 PHB1, ATPHB1 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Lfl_g03771 PHB1, ATPHB1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
MA_9438062g0010 PHB1, ATPHB1 Prohibitin-1, mitochondrial OS=Arabidopsis thaliana... 0.05 OrthoFinder output from all 47 species
Mp1g10410.1 PHB1, ATPHB1 Prohibitin-2, mitochondrial OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Msp_g01082 PHB1, ATPHB1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g12045 PHB1, ATPHB1 not classified & original description: none 0.07 OrthoFinder output from all 47 species
Pnu_g07645 PHB1, ATPHB1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pp3c25_1160V3.1 PHB1, ATPHB1, Pp3c25_1160 prohibitin 6 0.02 OrthoFinder output from all 47 species
Sam_g28993 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Solyc10g008140.3.1 PHB1, ATPHB1,... Prohibitin-2, mitochondrial OS=Arabidopsis thaliana... 0.06 OrthoFinder output from all 47 species
Spa_g12157 PHB1, ATPHB1 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g21133 PHB1, ATPHB1 not classified & original description: none 0.11 OrthoFinder output from all 47 species
Spa_g25323 PHB1, ATPHB1 not classified & original description: none 0.09 OrthoFinder output from all 47 species
Tin_g00443 PHB1, ATPHB1 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Zm00001e009600_P001 PHB2, ATPHB2,... Prohibitin-2, mitochondrial OS=Arabidopsis thaliana... 0.05 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0001522 pseudouridine synthesis IEP HCCA
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003723 RNA binding IEP HCCA
MF GO:0003746 translation elongation factor activity IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005515 protein binding IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
CC GO:0005575 cellular_component IEP HCCA
CC GO:0005737 cytoplasm IEP HCCA
CC GO:0005759 mitochondrial matrix IEP HCCA
BP GO:0006325 chromatin organization IEP HCCA
BP GO:0006334 nucleosome assembly IEP HCCA
BP GO:0006338 chromatin remodeling IEP HCCA
BP GO:0006417 regulation of translation IEP HCCA
BP GO:0006448 regulation of translational elongation IEP HCCA
BP GO:0006449 regulation of translational termination IEP HCCA
BP GO:0006457 protein folding IEP HCCA
MF GO:0008237 metallopeptidase activity IEP HCCA
BP GO:0009451 RNA modification IEP HCCA
BP GO:0009891 positive regulation of biosynthetic process IEP HCCA
BP GO:0009893 positive regulation of metabolic process IEP HCCA
MF GO:0009982 pseudouridine synthase activity IEP HCCA
BP GO:0010557 positive regulation of macromolecule biosynthetic process IEP HCCA
BP GO:0010604 positive regulation of macromolecule metabolic process IEP HCCA
BP GO:0010608 post-transcriptional regulation of gene expression IEP HCCA
BP GO:0010628 positive regulation of gene expression IEP HCCA
MF GO:0016462 pyrophosphatase activity IEP HCCA
MF GO:0016627 oxidoreductase activity, acting on the CH-CH group of donors IEP HCCA
MF GO:0016817 hydrolase activity, acting on acid anhydrides IEP HCCA
MF GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides IEP HCCA
MF GO:0016866 intramolecular transferase activity IEP HCCA
MF GO:0016887 ATP hydrolysis activity IEP HCCA
MF GO:0017111 ribonucleoside triphosphate phosphatase activity IEP HCCA
MF GO:0019843 rRNA binding IEP HCCA
MF GO:0030554 adenyl nucleotide binding IEP HCCA
BP GO:0031325 positive regulation of cellular metabolic process IEP HCCA
BP GO:0031328 positive regulation of cellular biosynthetic process IEP HCCA
CC GO:0031974 membrane-enclosed lumen IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
MF GO:0032977 membrane insertase activity IEP HCCA
BP GO:0034248 regulation of amide metabolic process IEP HCCA
BP GO:0034250 positive regulation of amide metabolic process IEP HCCA
BP GO:0034728 nucleosome organization IEP HCCA
MF GO:0043021 ribonucleoprotein complex binding IEP HCCA
MF GO:0043022 ribosome binding IEP HCCA
CC GO:0043233 organelle lumen IEP HCCA
BP GO:0043243 positive regulation of protein-containing complex disassembly IEP HCCA
BP GO:0043244 regulation of protein-containing complex disassembly IEP HCCA
BP GO:0043933 protein-containing complex organization IEP HCCA
MF GO:0044183 protein folding chaperone IEP HCCA
MF GO:0044877 protein-containing complex binding IEP HCCA
BP GO:0045727 positive regulation of translation IEP HCCA
BP GO:0045901 positive regulation of translational elongation IEP HCCA
BP GO:0045905 positive regulation of translational termination IEP HCCA
BP GO:0048518 positive regulation of biological process IEP HCCA
BP GO:0048522 positive regulation of cellular process IEP HCCA
MF GO:0051082 unfolded protein binding IEP HCCA
BP GO:0051128 regulation of cellular component organization IEP HCCA
BP GO:0051130 positive regulation of cellular component organization IEP HCCA
BP GO:0051173 positive regulation of nitrogen compound metabolic process IEP HCCA
BP GO:0051246 regulation of protein metabolic process IEP HCCA
BP GO:0051247 positive regulation of protein metabolic process IEP HCCA
BP GO:0065003 protein-containing complex assembly IEP HCCA
BP GO:0065004 protein-DNA complex assembly IEP HCCA
CC GO:0070013 intracellular organelle lumen IEP HCCA
BP GO:0071824 protein-DNA complex subunit organization IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
CC GO:0110165 cellular anatomical entity IEP HCCA
MF GO:0140104 molecular carrier activity IEP HCCA
MF GO:0140597 protein carrier chaperone IEP HCCA
MF GO:0140657 ATP-dependent activity IEP HCCA
MF GO:0140662 ATP-dependent protein folding chaperone IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
BP GO:2000112 regulation of cellular macromolecule biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR001107 Band_7 40 215
No external refs found!