Aliases : PKR1, CHR4
Description : DNA helicase *(MOM1) & original description: none
Gene families : OG0004810 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004810_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
AMTR_s00148p00090060 | MOM1, MOM,... | Helicase protein MOM1 OS=Arabidopsis thaliana | 0.08 | OrthoFinder output from all 47 species | |
AT1G08060 | MOM1, MOM | ATP-dependent helicase family protein | 0.08 | OrthoFinder output from all 47 species | |
Adi_g086251 | PKL, GYM, CHR6,... | DNA helicase *(MOM1) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Aev_g25806 | PKR1, CHR4 | DNA helicase *(MOM1) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Ala_g02731 | CHR5 | DNA helicase *(MOM1) & original description: none | 0.08 | OrthoFinder output from all 47 species | |
Als_g33419 | PKR1, CHR4 | DNA helicase *(MOM1) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Aop_g14006 | PKR1, CHR4 | DNA helicase *(MOM1) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Cba_g59347 | PKR1, CHR4 | DNA helicase *(MOM1) & original description: none | 0.04 | OrthoFinder output from all 47 species | |
Ceric.07G083100.1 | PKL, GYM, CHR6,... | DNA helicase *(MOM1) & original description:... | 0.06 | OrthoFinder output from all 47 species | |
Dac_g20551 | PKR1, CHR4 | DNA helicase *(MOM1) & original description: none | 0.05 | OrthoFinder output from all 47 species | |
Dcu_g15932 | PKR1, CHR4 | DNA helicase *(MOM1) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Ehy_g23969 | PKL, GYM, CHR6,... | DNA helicase *(MOM1) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Ehy_g25172 | PKL, GYM, CHR6,... | DNA helicase *(MOM1) & original description: none | 0.04 | OrthoFinder output from all 47 species | |
GSVIVT01025216001 | MOM1, MOM | Helicase protein MOM1 OS=Arabidopsis thaliana | 0.11 | OrthoFinder output from all 47 species | |
Gb_01673 | PKR1, CHR4 | Protein CHROMATIN REMODELING 4 OS=Arabidopsis thaliana... | 0.08 | OrthoFinder output from all 47 species | |
LOC_Os02g02050.1 | MOM1, MOM, LOC_Os02g02050 | Helicase protein MOM1 OS=Arabidopsis thaliana... | 0.05 | OrthoFinder output from all 47 species | |
LOC_Os06g01320.1 | MOM1, MOM, LOC_Os06g01320 | Helicase protein MOM1 OS=Arabidopsis thaliana... | 0.03 | OrthoFinder output from all 47 species | |
Len_g57128 | MOM1, MOM | DNA helicase *(MOM1) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
MA_9572741g0010 | ATMBD9, MBD9 | no hits & (original description: none) | 0.07 | OrthoFinder output from all 47 species | |
Msp_g13654 | PKR1, CHR4 | DNA helicase *(MOM1) & original description: none | 0.1 | OrthoFinder output from all 47 species | |
Nbi_g10244 | CHR5 | DNA helicase *(MOM1) & original description: none | 0.04 | OrthoFinder output from all 47 species | |
Ore_g25097 | PKR1, CHR4 | DNA helicase *(MOM1) & original description: none | 0.08 | OrthoFinder output from all 47 species | |
Pir_g62119 | PKR1, CHR4 | DNA helicase *(MOM1) & original description: none | 0.07 | OrthoFinder output from all 47 species | |
Ppi_g58376 | MOM1, MOM | DNA helicase *(MOM1) & original description: none | 0.05 | OrthoFinder output from all 47 species | |
Sacu_v1.1_s0063.g015657 | PKL, GYM, CHR6,... | programmed cell death metacaspase-like regulator *(MCP1)... | 0.03 | OrthoFinder output from all 47 species | |
Sam_g27616 | No alias | DNA helicase *(MOM1) & original description: none | 0.08 | OrthoFinder output from all 47 species | |
Smo440558 | PKL, GYM, CHR6,... | Protein CHROMATIN REMODELING 4 OS=Arabidopsis thaliana | 0.06 | OrthoFinder output from all 47 species | |
Solyc06g010240.3.1 | MOM1, MOM, Solyc06g010240 | Helicase protein MOM1 OS=Arabidopsis thaliana... | 0.1 | OrthoFinder output from all 47 species | |
Spa_g07008 | PKR1, CHR4 | DNA helicase *(MOM1) & original description: none | 0.07 | OrthoFinder output from all 47 species | |
Zm00001e036737_P001 | MOM1, MOM, Zm00001e036737 | Helicase protein MOM1 OS=Arabidopsis thaliana... | 0.08 | OrthoFinder output from all 47 species |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0005524 | ATP binding | IEA | Interproscan |
MF | GO:0140658 | ATP-dependent chromatin remodeler activity | IEA | Interproscan |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
BP | GO:0000184 | nuclear-transcribed mRNA catabolic process, nonsense-mediated decay | IEP | HCCA |
BP | GO:0000375 | RNA splicing, via transesterification reactions | IEP | HCCA |
BP | GO:0000377 | RNA splicing, via transesterification reactions with bulged adenosine as nucleophile | IEP | HCCA |
BP | GO:0000398 | mRNA splicing, via spliceosome | IEP | HCCA |
BP | GO:0000956 | nuclear-transcribed mRNA catabolic process | IEP | HCCA |
MF | GO:0003682 | chromatin binding | IEP | HCCA |
MF | GO:0004402 | histone acetyltransferase activity | IEP | HCCA |
MF | GO:0004674 | protein serine/threonine kinase activity | IEP | HCCA |
BP | GO:0006139 | nucleobase-containing compound metabolic process | IEP | HCCA |
BP | GO:0006397 | mRNA processing | IEP | HCCA |
BP | GO:0006401 | RNA catabolic process | IEP | HCCA |
BP | GO:0006402 | mRNA catabolic process | IEP | HCCA |
BP | GO:0006473 | protein acetylation | IEP | HCCA |
BP | GO:0006475 | internal protein amino acid acetylation | IEP | HCCA |
BP | GO:0006606 | protein import into nucleus | IEP | HCCA |
BP | GO:0006913 | nucleocytoplasmic transport | IEP | HCCA |
MF | GO:0008080 | N-acetyltransferase activity | IEP | HCCA |
BP | GO:0008380 | RNA splicing | IEP | HCCA |
BP | GO:0009057 | macromolecule catabolic process | IEP | HCCA |
BP | GO:0009892 | negative regulation of metabolic process | IEP | HCCA |
BP | GO:0010468 | regulation of gene expression | IEP | HCCA |
BP | GO:0010605 | negative regulation of macromolecule metabolic process | IEP | HCCA |
BP | GO:0010629 | negative regulation of gene expression | IEP | HCCA |
BP | GO:0016070 | RNA metabolic process | IEP | HCCA |
BP | GO:0016071 | mRNA metabolic process | IEP | HCCA |
MF | GO:0016407 | acetyltransferase activity | IEP | HCCA |
MF | GO:0016410 | N-acyltransferase activity | IEP | HCCA |
BP | GO:0016570 | histone modification | IEP | HCCA |
BP | GO:0016573 | histone acetylation | IEP | HCCA |
BP | GO:0018193 | peptidyl-amino acid modification | IEP | HCCA |
BP | GO:0018205 | peptidyl-lysine modification | IEP | HCCA |
BP | GO:0018393 | internal peptidyl-lysine acetylation | IEP | HCCA |
BP | GO:0018394 | peptidyl-lysine acetylation | IEP | HCCA |
BP | GO:0019222 | regulation of metabolic process | IEP | HCCA |
BP | GO:0019439 | aromatic compound catabolic process | IEP | HCCA |
BP | GO:0033365 | protein localization to organelle | IEP | HCCA |
MF | GO:0034212 | peptide N-acetyltransferase activity | IEP | HCCA |
BP | GO:0034504 | protein localization to nucleus | IEP | HCCA |
BP | GO:0034655 | nucleobase-containing compound catabolic process | IEP | HCCA |
BP | GO:0043170 | macromolecule metabolic process | IEP | HCCA |
BP | GO:0043543 | protein acylation | IEP | HCCA |
BP | GO:0044265 | cellular macromolecule catabolic process | IEP | HCCA |
BP | GO:0044270 | cellular nitrogen compound catabolic process | IEP | HCCA |
BP | GO:0046700 | heterocycle catabolic process | IEP | HCCA |
BP | GO:0048519 | negative regulation of biological process | IEP | HCCA |
BP | GO:0051169 | nuclear transport | IEP | HCCA |
BP | GO:0051170 | import into nucleus | IEP | HCCA |
BP | GO:0060255 | regulation of macromolecule metabolic process | IEP | HCCA |
MF | GO:0061733 | peptide-lysine-N-acetyltransferase activity | IEP | HCCA |
BP | GO:0072594 | establishment of protein localization to organelle | IEP | HCCA |
BP | GO:0090304 | nucleic acid metabolic process | IEP | HCCA |
MF | GO:0140096 | catalytic activity, acting on a protein | IEP | HCCA |
BP | GO:1901361 | organic cyclic compound catabolic process | IEP | HCCA |
No external refs found! |