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  5. Lfl_g06687

Lfl_g06687 (PEPC1, ATPEPC1, ATPPC1, PPC1)


Aliases : PEPC1, ATPEPC1, ATPPC1, PPC1

Description : EC_4.1 carbon-carbon lyase & original description: none


Gene families : OG0000643 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000643_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Lfl_g06687
Cluster HCCA: Cluster_114

Target Alias Description ECC score Gene Family Method Actions
Cba_g32641 PEPC1, ATPEPC1,... EC_4.1 carbon-carbon lyase & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.37G026100.1 ATPPC3, PPC3,... EC_4.1 carbon-carbon lyase & original description:... 0.02 OrthoFinder output from all 47 species
Dcu_g05789 ATPPC4, PPC4 PEP carboxylase *(PPC) & original description: none 0.02 OrthoFinder output from all 47 species
LOC_Os01g02050.1 ATPPC4, PPC4,... PEP carboxylase 0.03 OrthoFinder output from all 47 species
LOC_Os08g27840.1 PEPC1, ATPEPC1,... PEP carboxylase 0.03 OrthoFinder output from all 47 species
Ore_g15379 PEPC1, ATPEPC1,... EC_4.1 carbon-carbon lyase & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g10417 ATPPC3, PPC3 EC_4.1 carbon-carbon lyase & original description: none 0.02 OrthoFinder output from all 47 species
Solyc04g006970.4.1 ATPPC4, PPC4,... PEP carboxylase 0.02 OrthoFinder output from all 47 species
Solyc07g062530.3.1 ATPPC3, PPC3,... PEP carboxylase 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
BP GO:0006099 tricarboxylic acid cycle IEA Interproscan
MF GO:0008964 phosphoenolpyruvate carboxylase activity IEA Interproscan
BP GO:0015977 carbon fixation IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP HCCA
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP HCCA
MF GO:0033926 glycopeptide alpha-N-acetylgalactosaminidase activity IEP HCCA
MF GO:0140103 catalytic activity, acting on a glycoprotein IEP HCCA
InterPro domains Description Start Stop
IPR021135 PEP_COase 41 968
No external refs found!